Skip to content
CI tests

chore: synced file(s) with ssi-dk/diseasy #2253

Sign in to view logs

chore: synced file(s) with ssi-dk/diseasy

chore: synced file(s) with ssi-dk/diseasy #2253

Triggered via pull request January 22, 2025 08:35
@RasmusSkytteRasmusSkytte
synchronize #199
repo-sync/diseasy/default
Status Failure
Total duration 15m 25s
Artifacts 11

all-workflows.yaml

on: pull_request
⚙️ Context
0s
⚙️ Context
⚙️ Dispatch  /  ⚙️ Determine downstream workflow triggers
4s
⚙️ Dispatch / ⚙️ Determine downstream workflow triggers
⚙️ Dispatch  /  ...  /  🛠️ Store dependency versions
1m 40s
⚙️ Dispatch / update-lockfile / 🛠️ Store dependency versions
⚙️ Dispatch  /  🐞 Inspect trigger output
0s
⚙️ Dispatch / 🐞 Inspect trigger output
⚙️ Dispatch  /  ...  /  📖 Document
1m 36s
⚙️ Dispatch / document / 📖 Document
⚙️ Dispatch  /  ...  /  📖 README
1m 11s
⚙️ Dispatch / render-readme / 📖 README
⚙️ Dispatch  /  ...  /  📖 pkgdown: Build
1m 35s
⚙️ Dispatch / pkgdown / 📖 pkgdown: Build
⚙️ Dispatch  /  ...  /  🔎 Check: Build package
2m 42s
⚙️ Dispatch / R-CMD-check / 🔎 Check: Build package
Matrix: run-all-AEF-DFF-workflows / code-coverage / code-coverage-sqlite
⚙️ Dispatch  /  ...  /  🧪 Tests: DuckDB
5m 31s
⚙️ Dispatch / code-coverage / 🧪 Tests: DuckDB
⚙️ Dispatch  /  ...  /  🧪 Tests: PostgreSQL
5m 4s
⚙️ Dispatch / code-coverage / 🧪 Tests: PostgreSQL
⚙️ Dispatch  /  ...  /  🧪 Tests: SQL Server 2022
5m 38s
⚙️ Dispatch / code-coverage / 🧪 Tests: SQL Server 2022
⚙️ Dispatch  /  ...  /  🖋️ Lint
3m 4s
⚙️ Dispatch / lint / 🖋️ Lint
⚙️ Dispatch  /  ...  /  🔠 Spelling
57s
⚙️ Dispatch / spell-checker / 🔠 Spelling
⚙️ Dispatch  /  ...  /  🔍 pkgdown: Determine if pre-release
0s
⚙️ Dispatch / pkgdown / 🔍 pkgdown: Determine if pre-release
⚙️ Dispatch  /  ...  /  🔎 Check: ubuntu (release, no dependencies)
2m 25s
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release, no dependencies)
⚙️ Dispatch  /  ...  /  🔎 Check: ubuntu (r-devel)
6m 39s
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
⚙️ Dispatch  /  ...  /  🔎 Check: ubuntu (R v4.3.0)
7m 44s
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
Matrix: run-all-AEF-DFF-workflows / R-CMD-check / R-CMD-check
⚙️ Dispatch  /  ...  /  🧪 Tests: Upload to codecov.io
1m 26s
⚙️ Dispatch / code-coverage / 🧪 Tests: Upload to codecov.io
⚙️ Dispatch  /  ...  /  🧼 pkgdown: Clean up
0s
⚙️ Dispatch / pkgdown / 🧼 pkgdown: Clean up
⚙️ Dispatch  /  ...  /  🚀 pkgdown: Deploy
0s
⚙️ Dispatch / pkgdown / 🚀 pkgdown: Deploy
Fit to window
Zoom out
Zoom in

Annotations

48 errors and 18 warnings
⚙️ Dispatch / spell-checker / 🔠 Spelling
Process completed with exit code 1.
⚙️ Dispatch / pkgdown / 📖 pkgdown: Build
Process completed with exit code 1.
⚙️ Dispatch / lint / 🖋️ Lint
Process completed with exit code 31.
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release, no dependencies)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release, no dependencies)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release, no dependencies)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release, no dependencies)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release, no dependencies)
R CMD check found ERRORs
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release, no dependencies)
Process completed with exit code 1.
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
R CMD check found ERRORs
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
Process completed with exit code 1.
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
No such keg: /opt/homebrew/Cellar/[email protected]
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release)
R CMD check found ERRORs
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (release)
Process completed with exit code 1.
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (oldrel-1)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (oldrel-1)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (oldrel-1)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (oldrel-1)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (oldrel-1)
R CMD check found ERRORs
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (oldrel-1)
Process completed with exit code 1.
⚙️ Dispatch / R-CMD-check / 🔎 Check: windows (release)
Running examples in 'diseasystore-Ex.R' failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: windows (release)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: windows (release)
Running examples in 'diseasystore-Ex.R' failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: windows (release)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: windows (release)
R CMD check found ERRORs
⚙️ Dispatch / R-CMD-check / 🔎 Check: windows (release)
Process completed with exit code 1.
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
R CMD check found ERRORs
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
Process completed with exit code 1.
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (r-devel)
Failed to CreateArtifact: Received non-retryable error: Failed request: (409) Conflict: an artifact with this name already exists on the workflow run
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
Running examples in ‘diseasystore-Ex.R’ failed
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
object 'DiseasyActivity' not found
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
R CMD check found ERRORs
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
Process completed with exit code 1.
⚙️ Dispatch / R-CMD-check / 🔎 Check: ubuntu (R v4.3.0)
Failed to CreateArtifact: Received non-retryable error: Failed request: (409) Conflict: an artifact with this name already exists on the workflow run
⚙️ Context
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / ⚙️ Determine downstream workflow triggers
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / 🐞 Inspect trigger output
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / update-lockfile / 🛠️ Store dependency versions
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / render-readme / 📖 README
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / document / 📖 Document
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / pkgdown / 📖 pkgdown: Build
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / R-CMD-check / 🔎 Check: Build package
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / lint / 🖋️ Lint
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / lint / 🖋️ Lint: R/0_documentation.R#L229
file=R/0_documentation.R,line=229,col=1,[object_length_linter] Variable and function names should not be longer than 30 characters.
⚙️ Dispatch / code-coverage / 🧪 Tests: SQLite - w. schemas
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / code-coverage / 🧪 Tests: DuckDB
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / code-coverage / 🧪 Tests: SQLite
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
⚙️ Dispatch / R-CMD-check / 🔎 Check: macos (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
⚙️ Dispatch / code-coverage / 🧪 Tests: PostgreSQL
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / code-coverage / 🧪 Tests: SQL Server 2022
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
⚙️ Dispatch / code-coverage / 🧪 Tests: Upload to codecov.io
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Artifacts

Produced during runtime
Name Size
Linux-X64-r-0-results
1.78 MB
Linux-X64-roldrel-1-3-results
1.73 MB
Linux-X64-rrelease-2-results
1.76 MB
Windows-X64-rrelease-1-results
1.53 MB
coverage-duckdb
328 KB
coverage-postgres
328 KB
coverage-sql-server
328 KB
coverage-sqlite
328 KB
coverage-sqlite-schemas
328 KB
macOS-ARM64-rrelease-0-results
1.77 MB
package-tarball
350 KB