test: Run CI tests with SCDB v0.4

.github/workflows/R-CMD-check-v0.3.yaml

@@ -0,0 +1,117 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    inputs:
+      cache_version:
+        type: string
+        default: '1'
+
+jobs:
+  R-CMD-check:
+    name: "🔎 Check: SCDB v0.3, ${{ matrix.config.os }} (${{ matrix.config.r }})"
+    runs-on: ${{ matrix.config.os }}-latest
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macos,    r: 'release'}
+          - {os: windows,  r: 'release'}
+          - {os: ubuntu,   r: 'release'}
+          - {os: ubuntu,   r: 'oldrel-1'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+      BACKEND: SQLite
+      BACKEND_DRV: RSQLite::SQLite
+      BACKEND_ARGS: 'list(dbname = file.path(tempdir(), "SQLite.SQLite"))'
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          cache-version: ${{ inputs.cache_version }}
+          extra-packages: any::rcmdcheck
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true
+          args: c("--no-manual", "--as-cran", "--no-tests")
+
+  R-CMD-check-hard:
+    runs-on: ubuntu-latest
+    name: "🔎 Check: SCDB v0.3, ubuntu (release, no dependencies)"
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+      BACKEND: SQLite
+      BACKEND_DRV: RSQLite::SQLite
+      BACKEND_ARGS: 'list(dbname = file.path(tempdir(), "SQLite.SQLite"))'
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          dependencies: '"hard"'
+          cache: false
+          extra-packages: |
+            any::rcmdcheck
+            any::testthat
+            any::knitr
+            any::rmarkdown
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true
+
+
+  R-CMD-check-devel:
+    runs-on: ubuntu-latest
+    name: "🔎 Check: SCDB v0.3, ubuntu (r-devel)"
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+      BACKEND: SQLite
+      BACKEND_DRV: RSQLite::SQLite
+      BACKEND_ARGS: 'list(dbname = file.path(tempdir(), "SQLite.SQLite"))'
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          cache-version: ${{ inputs.cache_version }}
+          extra-packages: any::rcmdcheck
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true

.github/workflows/R-CMD-check-v0.4.yaml

@@ -0,0 +1,130 @@
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    inputs:
+      cache_version:
+        type: string
+        default: '0'
+
+jobs:
+  R-CMD-check:
+    name: "🔎 Check: SCDB v0.4, ${{ matrix.config.os }} (${{ matrix.config.r }})"
+    runs-on: ${{ matrix.config.os }}-latest
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macos,    r: 'release'}
+          - {os: windows,  r: 'release'}
+          - {os: ubuntu,   r: 'release'}
+          - {os: ubuntu,   r: 'oldrel-1'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+      BACKEND: SQLite
+      BACKEND_DRV: RSQLite::SQLite
+      BACKEND_ARGS: 'list(dbname = file.path(tempdir(), "SQLite.SQLite"))'
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set SCDB version to v0.4
+        run: |
+          perl -pi -e 's/SCDB \(>= 0.3.0\)/SCDB \(>= 0.4.0\)/g' DESCRIPTION
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          cache-version: ${{ inputs.cache_version }}
+          extra-packages: any::rcmdcheck, github::ssi-dk/[email protected]
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true
+          args: c("--no-manual", "--as-cran", "--no-tests")
+
+  R-CMD-check-hard:
+    runs-on: ubuntu-latest
+    name: "🔎 Check: SCDB v0.4, ubuntu (release, no dependencies)"
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+      BACKEND: SQLite
+      BACKEND_DRV: RSQLite::SQLite
+      BACKEND_ARGS: 'list(dbname = file.path(tempdir(), "SQLite.SQLite"))'
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set SCDB version to v0.4
+        run: |
+          perl -pi -e 's/SCDB \(>= 0.3.0\)/SCDB \(>= 0.4.0\)/g' DESCRIPTION
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          dependencies: '"hard"'
+          cache: false
+          extra-packages: |
+            any::rcmdcheck
+            any::testthat
+            any::knitr
+            any::rmarkdown
+            github::ssi-dk/[email protected]
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true
+
+
+  R-CMD-check-devel:
+    runs-on: ubuntu-latest
+    name: "🔎 Check: SCDB v0.4, ubuntu (r-devel)"
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+      BACKEND: SQLite
+      BACKEND_DRV: RSQLite::SQLite
+      BACKEND_ARGS: 'list(dbname = file.path(tempdir(), "SQLite.SQLite"))'
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set SCDB version to v0.4
+        run: |
+          perl -pi -e 's/SCDB \(>= 0.3.0\)/SCDB \(>= 0.4.0\)/g' DESCRIPTION
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          cache-version: ${{ inputs.cache_version }}
+          extra-packages: any::rcmdcheck, github::ssi-dk/[email protected]
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true

.github/workflows/all-workflows.yaml

@@ -32,6 +32,7 @@ jobs:
       event_name: ${{ github.event_name }}
       run_id: ${{ github.run_id }}
       main_branches: main
+      skip: code-coverage
 
       # code-coverage creates data bases for the tests. Here you can specify the schemas you need for the workflow
       schemas: test_ds,not_test_ds