Merge pull request #105 from ssi-dk/feat/clone-workspaces

feat: add ability to clone workspaces
ssi-dk · Sep 19, 2024 · 393fc5c · 393fc5c
2 parents 420f9ee + 33b0f6f
commit 393fc5c
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Showing 15 changed files with 431 additions and 1 deletion.
diff --git a/app/src/app/workspaces/clone-workspace.tsx b/app/src/app/workspaces/clone-workspace.tsx
@@ -0,0 +1,57 @@
+import React, { useCallback, useEffect, useState } from "react";
+import { useToast } from "@chakra-ui/react";
+import { useMutation } from "redux-query-react";
+import { useTranslation } from "react-i18next";
+import { cloneWorkspace } from "./workspaces-query-configs";
+import { IconButton } from "@chakra-ui/react";
+import { CopyIcon } from "@chakra-ui/icons";
+
+type Props = {
+  id: string;
+  samples: string[];
+};
+
+export function CloneWorkspace(props: Props) {
+  const { t } = useTranslation();
+  const toast = useToast();
+
+  const [
+    cloneWorkspaceQueryState,
+    cloneWorkspaceMutation,
+  ] = useMutation((name: string, id: string) => cloneWorkspace({ name, id, samples: props.samples }));
+
+  const [needsNotify, setNeedsNotify] = useState(true);
+
+  const cloneWorkspaceCallback = useCallback(() => {
+    const name = prompt("Workspace name");
+    if (name) {
+      setNeedsNotify(true);
+      cloneWorkspaceMutation(name, props.id);
+    }
+  }, [cloneWorkspaceMutation, setNeedsNotify, props.id]);
+
+  useEffect(() => {
+    if (
+      needsNotify &&
+      cloneWorkspaceQueryState.status >= 200 &&
+      cloneWorkspaceQueryState.status < 300 &&
+      !cloneWorkspaceQueryState.isPending
+    ) {
+      toast({
+        title: t("Workspace cloned"),
+        status: "info",
+        duration: 3000,
+        isClosable: true,
+      });
+      setNeedsNotify(false);
+    }
+  }, [t, cloneWorkspaceQueryState, toast, needsNotify, setNeedsNotify]);
+
+  return (
+    <IconButton
+      icon={<CopyIcon />}
+      aria-label={`${t("Clone workspace")}`}
+      onClick={cloneWorkspaceCallback}
+    />
+  );
+}
diff --git a/app/src/app/workspaces/workspaces-query-configs.ts b/app/src/app/workspaces/workspaces-query-configs.ts
@@ -9,8 +9,9 @@ import {
   DeleteWorkspaceRequest,
   PostWorkspaceRequest,
   DeleteWorkspaceSampleRequest,
+  cloneWorkspace as cloneWorkspaceApi,
 } from "sap-client";
-import { CreateWorkspace, WorkspaceInfo } from "sap-client/models";
+import { CreateWorkspace, WorkspaceInfo, CloneWorkspace } from "sap-client/models";
 import { getUrl } from "service";
 
 export type WorkspacesSlice = {
@@ -106,6 +107,30 @@ export const createWorkspace = (params: CreateWorkspace) => {
   return base;
 };
 
+export const cloneWorkspace = (params: CloneWorkspace & { samples: string[] }) => {
+  const base = cloneWorkspaceApi({ cloneWorkspace: params });
+  base.url = getUrl(base.url);
+
+  base.transform = (response) => {
+    if (!response.id) {
+      return undefined;
+    }
+    return { workspaces: [{ id: response.id, name: params.name, samples: params.samples }] };
+  };
+
+
+  base.update = {
+    workspaces: (oldValue, newValue) => {
+      if (!newValue) {
+        return oldValue;
+      }
+      return [].concat(...oldValue, ...newValue);
+    },
+  };
+  base.force = true;
+  return base;
+};
+
 export const updateWorkspace = (params: PostWorkspaceRequest) => {
   const base = postWorkspaceApi(params);
   base.url = getUrl(base.url);

diff --git a/app/src/app/workspaces/workspaces.tsx b/app/src/app/workspaces/workspaces.tsx
@@ -21,6 +21,7 @@ import type { Workspace } from "sap-client";
 import { DeleteWorkspace } from "./delete-workspace";
 import { CreateWorkspace } from "./create-workspace";
 import { ViewWorkspace } from "./view-workspace";
+import { CloneWorkspace } from "./clone-workspace";
 
 export function Workspaces() {
   const [workspacesQueryState] = useRequest(fetchWorkspaces());
@@ -63,6 +64,7 @@ export function Workspaces() {
                   <Td>
                     <div style={{ display: "flex", columnGap: "4px" }}>
                       <ViewWorkspace id={h.id} />
+                      <CloneWorkspace id={h.id} samples={h.samples}/>
                       <DeleteWorkspace id={h.id} />
                     </div>
                   </Td>

diff --git a/app/src/sap-client/apis/WorkspacesApi.ts b/app/src/sap-client/apis/WorkspacesApi.ts
@@ -15,6 +15,9 @@
 import { HttpMethods, QueryConfig, ResponseBody, ResponseText } from 'redux-query';
 import * as runtime from '../runtime';
 import {
+    CloneWorkspace,
+    CloneWorkspaceFromJSON,
+    CloneWorkspaceToJSON,
     CreateWorkspace,
     CreateWorkspaceFromJSON,
     CreateWorkspaceToJSON,
@@ -29,6 +32,10 @@ import {
     WorkspaceInfoToJSON,
 } from '../models';
 
+export interface CloneWorkspaceRequest {
+    cloneWorkspace?: CloneWorkspace;
+}
+
 export interface CreateWorkspaceRequest {
     createWorkspace?: CreateWorkspace;
 }
@@ -52,6 +59,48 @@ export interface PostWorkspaceRequest {
 }
 
 
+/**
+ */
+function cloneWorkspaceRaw<T>(requestParameters: CloneWorkspaceRequest, requestConfig: runtime.TypedQueryConfig<T, void> = {}): QueryConfig<T> {
+    let queryParameters = null;
+
+
+    const headerParameters : runtime.HttpHeaders = {};
+
+    headerParameters['Content-Type'] = 'application/json';
+
+
+    const { meta = {} } = requestConfig;
+
+    meta.authType = ['bearer'];
+    const config: QueryConfig<T> = {
+        url: `${runtime.Configuration.basePath}/workspace/clone`,
+        meta,
+        update: requestConfig.update,
+        queryKey: requestConfig.queryKey,
+        optimisticUpdate: requestConfig.optimisticUpdate,
+        force: requestConfig.force,
+        rollback: requestConfig.rollback,
+        options: {
+            method: 'POST',
+            headers: headerParameters,
+        },
+        body: queryParameters || CloneWorkspaceToJSON(requestParameters.cloneWorkspace),
+    };
+
+    const { transform: requestTransform } = requestConfig;
+    if (requestTransform) {
+    }
+
+    return config;
+}
+
+/**
+*/
+export function cloneWorkspace<T>(requestParameters: CloneWorkspaceRequest, requestConfig?: runtime.TypedQueryConfig<T, void>): QueryConfig<T> {
+    return cloneWorkspaceRaw(requestParameters, requestConfig);
+}
+
 /**
  */
 function createWorkspaceRaw<T>(requestParameters: CreateWorkspaceRequest, requestConfig: runtime.TypedQueryConfig<T, void> = {}): QueryConfig<T> {

diff --git a/app/src/sap-client/models/CloneWorkspace.ts b/app/src/sap-client/models/CloneWorkspace.ts
@@ -0,0 +1,52 @@
+// tslint:disable
+/**
+ * SOFI
+ * SOFI Sekvensanalyseplatform
+ *
+ * The version of the OpenAPI document: 0.1.0
+ * 
+ *
+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
+ * https://openapi-generator.tech
+ * Do not edit the class manually.
+ */
+
+import { exists, mapValues } from '../runtime';
+/**
+ * 
+ * @export
+ * @interface CloneWorkspace
+ */
+export interface CloneWorkspace  {
+    /**
+     * 
+     * @type {string}
+     * @memberof CloneWorkspace
+     */
+    name: string;
+    /**
+     * 
+     * @type {string}
+     * @memberof CloneWorkspace
+     */
+    id: string;
+}
+
+export function CloneWorkspaceFromJSON(json: any): CloneWorkspace {
+    return {
+        'name': json['name'],
+        'id': json['id'],
+    };
+}
+
+export function CloneWorkspaceToJSON(value?: CloneWorkspace): any {
+    if (value === undefined) {
+        return undefined;
+    }
+    return {
+        'name': value.name,
+        'id': value.id,
+    };
+}
+
+
diff --git a/app/src/sap-client/models/index.ts b/app/src/sap-client/models/index.ts
@@ -9,6 +9,7 @@ export * from './ApprovalRequest';
 export * from './ApprovalStatus';
 export * from './BaseMetadata';
 export * from './BioApiStatus';
+export * from './CloneWorkspace';
 export * from './Column';
 export * from './CreateWorkspace';
 export * from './DataClearance';

diff --git a/openapi_specs/SOFI/SOFI.yaml b/openapi_specs/SOFI/SOFI.yaml
@@ -43,6 +43,20 @@ paths:
       tags:
         - workspaces
       x-openapi-router-controller: web.src.SAP.generated.controllers.workspaces_controller
+  /workspace/clone:
+    post:
+      operationId: clone_workspace
+      requestBody:
+          content:
+            application/json:
+              schema:
+                $ref: "#/components/schemas/CloneWorkspace"
+      responses:
+        '204':
+          description: "Workspace cloned."
+      tags:
+        - workspaces
+      x-openapi-router-controller: web.src.SAP.generated.controllers.workspaces_controller
   /workspace/{workspace_id}/{sample_id}:
     delete:
       description: Delete sample from workspace
@@ -1550,6 +1564,19 @@ components:
       required:
       - name
 
+    CloneWorkspace:
+      properties:
+        name:
+          type: string
+          title: Name
+        id:
+          type: string
+          title: Id
+      type: object
+      required:
+      - name
+      - id
+
     UpdateWorkspace:
       properties:
         samples:

diff --git a/web/openapi_specs/SOFI/SOFI.yaml b/web/openapi_specs/SOFI/SOFI.yaml
@@ -43,6 +43,20 @@ paths:
       tags:
         - workspaces
       x-openapi-router-controller: web.src.SAP.generated.controllers.workspaces_controller
+  /workspace/clone:
+    post:
+      operationId: clone_workspace
+      requestBody:
+          content:
+            application/json:
+              schema:
+                $ref: "#/components/schemas/CloneWorkspace"
+      responses:
+        '204':
+          description: "Workspace cloned."
+      tags:
+        - workspaces
+      x-openapi-router-controller: web.src.SAP.generated.controllers.workspaces_controller
   /workspace/{workspace_id}/{sample_id}:
     delete:
       description: Delete sample from workspace
@@ -1550,6 +1564,19 @@ components:
       required:
       - name
 
+    CloneWorkspace:
+      properties:
+        name:
+          type: string
+          title: Name
+        id:
+          type: string
+          title: Id
+      type: object
+      required:
+      - name
+      - id
+
     UpdateWorkspace:
       properties:
         samples:

diff --git a/web/src/SAP/generated/controllers/workspaces_controller.py b/web/src/SAP/generated/controllers/workspaces_controller.py
@@ -4,6 +4,21 @@
 from .. import util
 from ...src.controllers import WorkspacesController
 
+def clone_workspace(user, token_info, clone_workspace=None):  # noqa: E501
+    """clone_workspace
+
+     # noqa: E501
+
+    :param clone_workspace: 
+    :type clone_workspace: dict | bytes
+
+    :rtype: None
+    """
+    if connexion.request.is_json:
+        from ..models import CloneWorkspace
+        clone_workspace = CloneWorkspace.from_dict(connexion.request.get_json())  # noqa: E501
+    return WorkspacesController.clone_workspace(user, token_info, clone_workspace)
+
 def create_workspace(user, token_info, create_workspace=None):  # noqa: E501
     """create_workspace
 

diff --git a/web/src/SAP/generated/models/__init__.py b/web/src/SAP/generated/models/__init__.py
@@ -15,6 +15,7 @@
 from .base_metadata import BaseMetadata
 from .bio_api_status import BioApiStatus
 from .bulk_upload_request import BulkUploadRequest
+from .clone_workspace import CloneWorkspace
 from .column import Column
 from .create_workspace import CreateWorkspace
 from .data_clearance import DataClearance