docs: updated software list

stanford-rc · Sep 12, 2024 · c8ec8e9 · c8ec8e9
1 parent e8e69fb
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Showing 2 changed files with 20 additions and 2 deletions.
diff --git a/includes/data/software.yml b/includes/data/software.yml
@@ -4820,7 +4820,7 @@ software_modules:
           checks on raw sequence data coming from high throughput sequencing pipelines.,
         markedDefault: false, versionName: 0.11.8}
     - categories: biology, genomics
-      defaultVersionName: 0.7.1
+      defaultVersionName: 0.7.3
       description: Dorado is a high-performance, easy-to-use, open source basecaller
         for Oxford Nanopore reads.
       package: dorado
@@ -4831,7 +4831,7 @@ software_modules:
       - {description: 'Dorado is a high-performance, easy-to-use, open source basecaller
           for Oxford Nanopore reads.', markedDefault: false, versionName: 0.5.3}
       - {description: 'Dorado is a high-performance, easy-to-use, open source basecaller
-          for Oxford Nanopore reads.', markedDefault: false, versionName: 0.7.1}
+          for Oxford Nanopore reads.', markedDefault: false, versionName: 0.7.3}
     - categories: biology, genomics
       defaultVersionName: 0.44.0
       description: kallisto is a program for quantifying abundances of transcripts

diff --git a/src/docs/software/updates.xml b/src/docs/software/updates.xml
@@ -5,6 +5,24 @@
 <description>Sherlock software update feed</description>
 <link>https://www.sherlock.stanford.edu/docs/software/list</link>
 <atom:link href="https://www.sherlock.stanford.edu/docs/software/updates.xml" rel="self" type="application/rss+xml"/>
+    <item>
+        <title>New version: biology/dorado version 0.7.1</title>
+        <description></description>
+        <link></link>
+        <guid>https://www.sherlock.stanford.edu/docs/software/list/?add:v=0.7.1#dorado</guid>
+        <category></category>
+        <author>[email protected] (Kilian Cavalotti)</author>
+        <pubDate>Thu, 12 Sep 2024 09:48:08 -0700</pubDate>
+    </item>
+    <item>
+        <title>New version: biology/dorado version 0.7.3</title>
+        <description>Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads.</description>
+        <link>https://github.com/nanoporetech/dorado</link>
+        <guid>https://www.sherlock.stanford.edu/docs/software/list/?add:v=0.7.3#dorado</guid>
+        <category>biology, genomics</category>
+        <author>[email protected] (Kilian Cavalotti)</author>
+        <pubDate>Thu, 12 Sep 2024 09:48:08 -0700</pubDate>
+    </item>
     <item>
         <title>New version: biology/py-scanpy version 1.10.2_py312</title>
         <description>Scanpy is a scalable toolkit for analyzing single-cell gene expression data.</description>