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Steinegger Lab

Steinegger Lab Github repositories

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  1. foldseek foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    C 701 93

  2. foldcomp foldcomp Public

    Compressing protein structures effectively with torsion angles

    C++ 145 14

  3. Metabuli Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    C++ 99 8

  4. ufcg ufcg Public

    UFCG: Universal Fungal Core Genes

    Java 29

  5. conterminator conterminator Public

    Detection of incorrectly labeled sequences across kingdoms

    C 72 7

Repositories

Showing 10 of 23 repositories
  • foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    steineggerlab/foldseek’s past year of commit activity
    C 701 GPL-3.0 93 128 1 Updated Jul 14, 2024
  • ufcg Public

    UFCG: Universal Fungal Core Genes

    steineggerlab/ufcg’s past year of commit activity
    Java 29 GPL-3.0 0 15 0 Updated Jul 9, 2024
  • alphafold Public Forked from google-deepmind/alphafold

    Open source code for AlphaFold.

    steineggerlab/alphafold’s past year of commit activity
    Python 10 Apache-2.0 2,171 0 2 Updated Jul 9, 2024
  • unicore Public

    Universal and efficient core gene phylogeny with Foldseek and ProstT5

    steineggerlab/unicore’s past year of commit activity
    Rust 7 GPL-3.0 0 0 0 Updated Jul 7, 2024
  • foldmason Public
    steineggerlab/foldmason’s past year of commit activity
    C 15 GPL-3.0 0 4 0 Updated Jul 3, 2024
  • ufcg-web Public

    UFCG website

    steineggerlab/ufcg-web’s past year of commit activity
    HTML 1 GPL-3.0 0 0 0 Updated Jul 2, 2024
  • foldseek-multimer-analysis Public
    steineggerlab/foldseek-multimer-analysis’s past year of commit activity
    Python 1 0 0 0 Updated Jun 27, 2024
  • colabfold-protocol Public

    ColabFold protocol

    steineggerlab/colabfold-protocol’s past year of commit activity
    Jupyter Notebook 21 3 0 0 Updated Jun 22, 2024
  • SeekRank Public

    Rank homologous protein sequences based on a regressor trained on experimental measures

    steineggerlab/SeekRank’s past year of commit activity
    Jupyter Notebook 5 MIT 0 0 0 Updated Jun 22, 2024
  • Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    steineggerlab/Metabuli’s past year of commit activity
    C++ 99 GPL-3.0 8 8 0 Updated Jun 21, 2024
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