Replace pylint,flake,isort and bandit with ruff #86
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My last PR was a bit painful as some of our checks failed due to development in the respective libraries and tools and not due to my code changes. Therefore, and for the sake of simplicity, I have replaced pylint, flake, isort and bandit with ruff.
In this context, I have fixed some of the problems that ruff has now pointed out, or created exceptions for them. There are no functional changes here.