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feature(isoslam): Adds functions to extract features from reads #50

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feature(isoslam): Adds functions to extract features from reads

feature(isoslam): Adds functions to extract features from reads #50

Triggered via pull request December 6, 2024 15:17
@ns-rsens-rse
synchronize #106
ns-rse/88-extract-start-end-length-from-reads
Status Failure
Total duration 5m 46s
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tests.yaml

on: pull_request
Matrix: build
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23 errors
Ex1 (3.11, macos-latest)
The action 'Setup tmate session' has timed out after 5 minutes.
Ex1 (3.11, macos-latest): tests/test_isoslam.py#L120
test_extract_features_from_read_param[28584 - Assignment and Transcript are None] ValueError: fetch called on bamfile without index
Ex1 (3.11, macos-latest)
Process completed with exit code 1.
Ex1 (3.11, ubuntu-latest)
The job was canceled because "macos-latest_3_11" failed.
Ex1 (3.11, ubuntu-latest)
The operation was canceled.
Ex1 (3.11, ubuntu-latest): tests/test_isoslam.py#L120
test_extract_features_from_read_param[28584 - Assignment and Transcript are None] ValueError: fetch called on bamfile without index
Ex1 (3.11, ubuntu-latest)
Process completed with exit code 1.
Ex1 (3.10, ubuntu-latest)
The job was canceled because "macos-latest_3_11" failed.
Ex1 (3.10, ubuntu-latest): tests/test_isoslam.py#L120
test_extract_features_from_read_param[28584 - Assignment and Transcript are None] ValueError: fetch called on bamfile without index
Ex1 (3.10, ubuntu-latest)
Process completed with exit code 1.
Ex1 (3.10, ubuntu-latest)
The operation was canceled.
Ex1 (3.12, ubuntu-latest)
The job was canceled because "macos-latest_3_11" failed.
Ex1 (3.12, ubuntu-latest)
The operation was canceled.
Ex1 (3.12, ubuntu-latest): tests/test_isoslam.py#L120
test_extract_features_from_read_param[28584 - Assignment and Transcript are None] ValueError: fetch called on bamfile without index
Ex1 (3.12, ubuntu-latest)
Process completed with exit code 1.
Ex1 (3.10, macos-latest)
The job was canceled because "macos-latest_3_11" failed.
Ex1 (3.10, macos-latest)
The operation was canceled.
Ex1 (3.10, macos-latest): tests/test_isoslam.py#L120
test_extract_features_from_read_param[28584 - Assignment and Transcript are None] ValueError: fetch called on bamfile without index
Ex1 (3.10, macos-latest)
Process completed with exit code 1.
Ex1 (3.12, macos-latest)
The job was canceled because "macos-latest_3_11" failed.
Ex1 (3.12, macos-latest): tests/test_isoslam.py#L120
test_extract_features_from_read_param[28584 - Assignment and Transcript are None] ValueError: fetch called on bamfile without index
Ex1 (3.12, macos-latest)
Process completed with exit code 1.
Ex1 (3.12, macos-latest)
The operation was canceled.