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ci: install cgat from GitHub v0.7.4
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ns-rse committed Nov 28, 2024
1 parent b1dd115 commit e26cf63
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1 change: 1 addition & 0 deletions .github/workflows/sphinx_docs_to_gh_pages.yaml
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Expand Up @@ -30,6 +30,7 @@ jobs:
pip install Cython
pip install pysam
pip install wheel
pip install --no-build-isolation git+https://github.com/cgat-developers/[email protected]
pip3 install --no-build-isolation .[docs]
- name: Running Sphinx to gh-pages Action
# Uncomment if only tagged releases are to have documentation built
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4 changes: 2 additions & 2 deletions .github/workflows/tests.yaml
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Expand Up @@ -47,8 +47,8 @@ jobs:
pip install pysam
pip install wheel
pip install --no-build-isolation cgatcore
pip install --no-build-isolation cgat
pip install -e .[tests]
pip install --no-build-isolation git+https://github.com/cgat-developers/[email protected]
pip install --no-build-isolation -e .[tests]
- name: Test with pytest
run: |
pytest --cov=isoslam --cov-report=xml --mpl -x
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