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re_mapping, re analysis for grh37 snps

  • GWAS_snp_positions_on_grch37_autosome_remove_patch.tsv as shown in the file name, is a list of positions for snps mapped to autosome main assembly only
  • entries_standard_rs_id.tsv GWAS-catalog entries with standard rs id reported SNPs.
  • entries_non_rs_id.tsv GWAS-catalog entries with non-standard rs id reported SNPs.
  • GWAS_entries_grch37_remapping.tsv is the final file for GWAS-Catalog SNPs mapping to GRCh37
  • add_remapped_gene_to_standard_entries.py** is the script used for add mapped genes to GWAS-Catalog SNPs ---- generated GWAS_entries_grch37_remapping.tsv

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