Clean script

Fix validate flag

Fix

support/Environments/urania.sh

@@ -20,9 +20,10 @@ spectre_load_modules() {
     module load paraview/5.10
     # Load Spack environment
     source /u/guilara/repos/spack/share/spack/setup-env.sh
-    spack env activate env3_spectre_impi
+    source /urania/u/guilara/repos/spack/var/spack/environments\
+/env3_spectre_impi/loads
     # Load python environment
-    source $SPECTRE_HOME/env/bin/activate
+    source /u/guilara/envs/spectre_env
 }
 
 spectre_unload_modules() {
@@ -57,8 +58,7 @@ spectre_run_cmake() {
           -D MEMORY_ALLOCATOR=JEMALLOC \
           -D BUILD_PYTHON_BINDINGS=ON \
           -D MACHINE=Urania \
-          -D Python_EXECUTABLE=${SPECTRE_HOME}/env/bin/python \
-          -D Catch2_DIR=/u/guilara/repos/Catch2/install_dir/lib64/cmake/Catch2 \
+          -D Catch2_DIR=/u/guilara/repos/Catch2/install_dir/lib64/cmake/Catch2
           -D MPI_C_COMPILER=/mpcdf/soft/SLE_15/packages/skylake\
 /impi/gcc_11-11.2.0/2021.7.1/bin/mpigcc \
           -D MPI_CXX_COMPILER=/mpcdf/soft/SLE_15/packages/skylake\

support/Python/Schedule.py

@@ -149,7 +149,7 @@ def schedule(
     submit: Optional[bool] = None,
     clean_output: bool = False,
     force: bool = False,
-    validate: Optional[bool] = None,
+    validate: Optional[bool] = True,
     extra_params: dict = {},
     **kwargs,
 ) -> Optional[subprocess.CompletedProcess]:
@@ -551,8 +551,8 @@ def schedule(
         force=force,
     )
 
-    if validate or validate is None:
-        # Validate input file
+    # Validate input file
+    if validate:
         validate_input_file(
             input_file_path.resolve(), executable=executable, work_dir=run_dir
         )
@@ -868,7 +868,7 @@ def scheduler_options(f):
     )
     @click.option(
         "--validate/--no-validate",
-        default=None,
+        default=True,
         help="Validate or skip the validation of the input file.",
     )
     # Scheduling options

support/SubmitScripts/Urania.sh

@@ -3,49 +3,32 @@
 # Distributed under the MIT License.
 # See LICENSE.txt for details.
 
-# Supercomputer at the Max Planck Computing Data Facility.
-# More information:
+# Uranina -- HPC cluster of ACR division of MPI for Grav Physics, housed at the
+# Max Planck Computing & Data Facility.
 # https://docs.mpcdf.mpg.de/doc/computing/clusters/systems/Gravitational_Physics_ACR.html
 
 {% block head %}
 {{ super() -}}
-#SBATCH -D ./
 #SBATCH --nodes {{ num_nodes | default(1) }}
 #SBATCH --ntasks-per-node=1
 #SBATCH --ntasks-per-core=1
 #SBATCH --cpus-per-task=72
-#SBATCH --mem=240000
 #SBATCH -t {{ time_limit | default("1-00:00:00") }}
-#SBATCH -p {{ queue | default("p.debug") }}
+#SBATCH -p {{ queue | default("p.urania") }}
 {% endblock %}
 
 {% block charm_ppn %}
-# One thread for communication
+# Two thread for communication
 CHARM_PPN=$(expr ${SLURM_CPUS_PER_TASK} - 2)
 {% endblock %}
 
 {% block list_modules %}
 # Load compiler and MPI modules with explicit version specifications,
 # consistently with the versions used to build the executable.
-module purge
-module load gcc/11
-module load impi/2021.7
-module load boost/1.79
-module load gsl/1.16
-module load cmake/3.26
-module load hdf5-serial/1.12.2
-module load anaconda/3/2021.11
+source ${SPECTRE_HOME}/support/Environments/urania.sh
+spectre_load_modules
+spectre_setup_charm_paths
 
-# Load Spack environment
-source /u/guilara/repos/spack/share/spack/setup-env.sh
-spack env activate env3_spectre_impi
-
-# Define Charm paths
-export CHARM_ROOT=/u/guilara/charm_impi_2/mpi-linux-x86_64-smp
-export PATH=$PATH:/u/guilara/charm_impi_2/mpi-linux-x86_64-smp/bin
-
-# Load python environment
-source $SPECTRE_HOME/env/bin/activate
 {% endblock %}
 
 {% block run_command %}