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Implement thresholding
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szhan committed Feb 27, 2024
1 parent 64883cd commit 7c4b22e
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2 changes: 1 addition & 1 deletion python/tests/beagle_numba.py
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Expand Up @@ -462,7 +462,7 @@ def interpolate_allele_probs(
1. Hidden state probability matrix at genotyped positions of size (m, h).
2. Reference haplotypes subsetted to ungenotyped positions of size (x, h).
If thresholding is employed, it emulates BEAGLE's way to approximate calculations.
If thresholding is employed, it replicates BEAGLE's way to approximate calculations.
See 'setFirstAlleleProbs', 'setAlleleProbs', and 'setLastAlleleProbs'
in 'LSHapBaum.java' in BEAGLE 4.1 source code.
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