Add GeoMean, fix locking in chains, tighten axis queries in views.

tanaylab · Apr 9, 2024 · 4aa5aec · 4aa5aec
1 parent f3f43a1
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Showing 16 changed files with 594 additions and 277 deletions.
diff --git a/docs/v0.1.0/.documenter-siteinfo.json b/docs/v0.1.0/.documenter-siteinfo.json
@@ -1 +1 @@
-{"documenter":{"julia_version":"1.10.2","generation_timestamp":"2024-04-09T14:52:15","documenter_version":"1.3.0"}}
+{"documenter":{"julia_version":"1.10.2","generation_timestamp":"2024-04-09T17:27:42","documenter_version":"1.3.0"}}
diff --git a/docs/v0.1.0/index.html b/docs/v0.1.0/index.html
@@ -982,6 +982,12 @@ <h1 id="Index">
 </a>
 </li>
 <li>
+<a href="operations.html#Daf.Operations.GeoMean">
+<code>Daf.Operations.GeoMean
+</code>
+</a>
+</li>
+<li>
 <a href="operations.html#Daf.Operations.Log">
 <code>Daf.Operations.Log
 </code>
@@ -1780,6 +1786,12 @@ <h1 id="Index">
 </a>
 </li>
 <li>
+<a href="queries.html#Daf.Queries.is_axis_query">
+<code>Daf.Queries.is_axis_query
+</code>
+</a>
+</li>
+<li>
 <a href="queries.html#Daf.Queries.query_result_dimensions">
 <code>Daf.Queries.query_result_dimensions
 </code>

diff --git a/docs/v0.1.0/objects.inv b/docs/v0.1.0/objects.inv
diff --git a/docs/v0.1.0/operations.html b/docs/v0.1.0/operations.html
@@ -741,6 +741,44 @@ <h2 id="Reduction-operations">
 <header>
 <a class="docstring-article-toggle-button fa-solid fa-chevron-down" href="javascript:;" title="Collapse docstring">
 </a>
+<a class="docstring-binding" id="Daf.Operations.GeoMean" href="#Daf.Operations.GeoMean">
+<code>Daf.Operations.GeoMean
+</code>
+</a> — 
+<span class="docstring-category">Type
+</span>
+</header>
+<section>
+<div>
+<pre>
+<code class="language-julia hljs">GeoMean(; dtype::Maybe{Type} = nothing, eps::StorageNumber = 0.0)
+</code>
+</pre>
+<p>Reduction operation that returns the geometric mean value.
+</p>
+<p>
+<strong>Parameters
+</strong>
+</p>
+<p>
+<code>dtype
+</code> - The default output data type is the 
+<a href="operations.html#Daf.Operations.float_dtype_for">
+<code>float_dtype_for
+</code>
+</a> of the input data type.
+</p>
+<p>
+<code>eps
+</code> - The regularization factor added to each value and subtracted from the raw geo-mean, to deal with zero values.
+</p>
+</div>
+</section>
+</article>
+<article class="docstring">
+<header>
+<a class="docstring-article-toggle-button fa-solid fa-chevron-down" href="javascript:;" title="Collapse docstring">
+</a>
 <a class="docstring-binding" id="Daf.Operations.Std" href="#Daf.Operations.Std">
 <code>Daf.Operations.Std
 </code>
@@ -1316,6 +1354,12 @@ <h2 id="Index">
 </a>
 </li>
 <li>
+<a href="operations.html#Daf.Operations.GeoMean">
+<code>Daf.Operations.GeoMean
+</code>
+</a>
+</li>
+<li>
 <a href="operations.html#Daf.Operations.Log">
 <code>Daf.Operations.Log
 </code>