update kwargs passing

theislab · Jun 18, 2024 · 8bd0ada · 8bd0ada
1 parent c2e091c
commit 8bd0ada
Showing 2 changed files with 38 additions and 39 deletions.
diff --git a/examples/problems/900_annotation_mapping.ipynb b/examples/problems/900_annotation_mapping.ipynb
@@ -193,13 +193,7 @@
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "\u001b[34mINFO    \u001b[0m Computing pca with `\u001b[33mn_comps\u001b[0m=\u001b[1;36m30\u001b[0m` for `xy` using `adata.X`                                                  \n"
-     ]
-    },
-    {
-     "name": "stdout",
-     "output_type": "stream",
-     "text": [
+      "\u001b[34mINFO    \u001b[0m Computing pca with `\u001b[33mn_comps\u001b[0m=\u001b[1;36m30\u001b[0m` for `xy` using `adata.X`                                                  \n",
       "\u001b[34mINFO    \u001b[0m Normalizing spatial coordinates of `x`.                                                                   \n",
       "\u001b[34mINFO    \u001b[0m Solving `\u001b[1;36m1\u001b[0m` problems                                                                                      \n",
       "\u001b[34mINFO    \u001b[0m Solving problem OTProblem\u001b[1m[\u001b[0m\u001b[33mstage\u001b[0m=\u001b[32m'prepared'\u001b[0m, \u001b[33mshape\u001b[0m=\u001b[1m(\u001b[0m\u001b[1;36m3039\u001b[0m, \u001b[1;36m1297\u001b[0m\u001b[1m)\u001b[0m\u001b[1m]\u001b[0m.                                          \n"
@@ -208,7 +202,7 @@
    ],
    "source": [
     "mp = mp.prepare(\n",
-    "    sc_attr={\"attr\": \"obsm\", \"key\": \"X_pca\"}, kwargs={\"callback_kwargs\": \"local_pca\"}\n",
+    "    sc_attr={\"attr\": \"obsm\", \"key\": \"X_pca\"}, **{\"xy_callback\": \"local-pca\"}\n",
     ").solve()"
    ]
   },
@@ -307,7 +301,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 12,
+   "execution_count": null,
    "metadata": {},
    "outputs": [
     {
@@ -345,7 +339,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 13,
+   "execution_count": null,
    "metadata": {},
    "outputs": [
     {
@@ -372,7 +366,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 20,
+   "execution_count": null,
    "metadata": {},
    "outputs": [
     {

diff --git a/tutorials/400_spatial_mapping.ipynb b/tutorials/400_spatial_mapping.ipynb