troutpy

Package for the analysis of transcripts outside segmented cells in python

Getting started

Please refer to the documentation, in particular, the API documentation.

Installation

You neeed to have Python 3.10 or newer installed on your system. If you don't have Python installed, we recommend installing Mambaforge.

There are several alternative options to install troutpy:

1. Install the latest development version:

pip install git+https://github.com/theislab/troutpy.git@main

Usage

Please have a look at the Usage documentation and the tutorials.

import troutpy as tp

Release notes

See the changelog.

Contact

For questions and help requests, you can reach out in the scverse discourse. If you found a bug, please use the issue tracker.

Citation

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