Releases: thomasp85/ggraph
Releases · thomasp85/ggraph
ggraph 2.2.1
ggraph 2.2.0
- Fix a precision bug in circle pack layout (#345)
GeomEdgeTile
now usesedge_width
instead ofedge_size
for the border- Fix a bug in
geom_edge_parallel()
when used with edge labels. Edges are now
correctly offset, though label may still overlap (#227) - Fix a bug with auto layout on undirected trees (#247)
- Fix a bug in
get_con()
that would lead to wrong matching of additional data
(#249) - Allow
na.rm
in geoms (#301) - If
check_overlap = TRUE
ingeom_node_text()
the rendering order is
reversed so that the top nodes are rendered, not the bottom ones - Updated guides to the new ggplot2 interface. For
guide_edge_direction()
,
this update adds the option to use labels instead of an arrow using the
labels
argument. create_layout()
now returns a modified tibble rather than a data.frame- The
...
inget_nodes()
,get_edges()
, andget_con()
now accepts
tidy evaluation.get_nodes()
andget_con()
will get evaluated on the node
data in the original order (layouts may reorder nodes), andget_edges()
will
get evaluated on the edge data (#272) - The linear layout has gained a
weight
argument allowing you to set how much
space each node occupy. Further, the layout now calculates statistics so that
it can be used in conjunction withgeom_node_tile()
andgeom_node_arc_bar()
- New layout added. Cactustree is a hierarchical layout optimised for
hierarchical edge bundling by placing nodes as budding circles on the
periphery of their parent (#226) - Updated layout functions from the graphlayouts package to support grouped and
constrained versions (centrality, focus, and stress layouts) - Added H Tree layout for binary trees (#58)
- Added
geom_edge_bundle_force()
,geom_edge_bundle_path()
, and
geom_edge_bundle_minimal()
(+ variants) to provide support for edge bundling
(#267) - Add "metro" layout from graphlayouts for metroline like layouts
- Add
layout_sf()
,geom_node_sf()
andgeom_edge_sf()
to support plotting of
sfnetwork
objects (#275)
ggraph 2.1.0
- Update errors to use cli
- Use vctrs internally
- Add binned edge scales
- Fix a bug where removing the full data with a filter would throw an error
- Make sure all lyaout functions now correctly merge the layout with the node
data without getting duplicate column names - Fixed a bug in the start_cap implementation that would cause edges consisting
of only two points to disappear - Fixed a bug in
facet_graph()
when using.
on either dimension (#313) - Move dendrogram layout calculations to compiled code to avoid R's recursion
stack limitations (#311) - Fixed a bug in the circle pack algorithm that could result in overlapping
circles (#305)
ggraph 2.0.6
- Fix vignette errors on CRAN
ggraph 2.0.5
- Fix deprecation of std::random_shuffle in C++14 by specifyin C++11 as the
compile version
ggraph 2.0.4
- Fix bug in faceting functions where using algorithms based on sampling
directly would result in errors - Move CI to GitHub Actions
- Warn if a precalculated layout is passed to
layout
increate_layout()
(#208) - Warn when setting
dim
to a value higher than 2 in igraph layouts (#160) - Fix bug when trying to plot a graph with no edges (#214)
- Fix a bug in edge geoms due to a typo (#246)
- Fix a bug in edge geoms where setting
label_colour
toNA
would turn it off
instead of inheriting the colour of the edge (#238) - Fix a bug in edge geoms that prevented edge labels from being parsed as
expressions (#245) - Improve performance of dendrogram layout when calculating depth (#248)
- Fix a bug in hive layout when segmenting by a factor with unused levels (#252)
- Fix a bug in capping of path due to updates in grid. Setting cap unit to
native
now works as expected again (#254) - Fix a bug in
get_con()
that would require input to be sorted in thefrom
vector (#258)
ggraph 2.0.3
- Fix bug in
geom_edge_elbow()
that resulted in duplicatedgroup
columns in
the data.
ggraph 2.0.2
- Remove reshape2 dependency
ggraph 2.0.1
- Fix bug in ggraph that will surface with the next grid release
- Deprecate
qgraph()
in favour ofautograph()
to avoid name collision with
qgraph::qgraph()
.autograph()
is now also a generic with a default method,
so you can provide your own specific ggraph plot method for your network
classes
ggraph 2.0.0
This release is a major release including many new features, bug fixes and some
breaking changes.
Breaking changes
-
Use tidygraph as the central data format. The results of this are several:
- All graph object supported by tidygraph are now supported on even footing in
ggraph. All layouts are now available to any graph class - BREAKING The
"even"
layout for dendrograms are no more, but can be
obtained by using the"dendrogram"
layout withheight = NULL
- BREAKING All layouts uses NSE for arguments that refer to node and edge
variables, instead of passing in strings that refer to the variable name. - All examples and vignettes now uses tidygraph for graph manipulation
resulting in much cleaner code. tree_apply
has been removed in favour of usingtidygraph::map_bfs_*
geom_edge_elbow
is no longer only available to dendrogram objects- tidygraph algorithms can now be used directly within ggraph functions. E.g.
you can havesort.by = node_rank_hclust()
in your specification of a
linear layout, oraes(colour = group_infomap())
in node geoms
This big change fixes #21, #72, #79, and #81. A vignette has been added to
describe the integration in more detail - All graph object supported by tidygraph are now supported on even footing in
-
The
curvature
argument fromgeom_edge_arc()
andgeom_edge_hive()
as well
as thespread
argument fromgeom_edge_fan()
has been deprecated in favor
of the newstrength
argument. -
ggraph plots now gets constructed with grid and axes removed from the default
theme.
New features
- Add equal-angle and equal-daylight unrooted tree layouts (#59)
- Interface with the graphlayouts package and make all its layouts available.
The auto layout now uses the stress layout for standard graphs (sparse stress)
for larger graphs. - Added length argument to the dendrogram layout to allow the layout to be based
on edge length rather than node heights (#124). - Added
geom_edge_parallel()
for drawing multiedges as parallel lines (#191) - Added fabric layout to create biofabric plots. Also added
geom_node_range()
andgeom_edge_span()
for visualising such layouts (#47) - Added
geom_edge_bend()
for drawing soft elbows (#45) - Added
geom_node_voronoi()
for displaying nodes as voronoi tiles (#100) - Added
qgraph()
for quickly creating a standard network plot for explorative
purpose (#94) - All non-straight line-based edge geoms now has a
strength
parameter that
controls their deviation from a straight line.0
will always give a straight
line while1
will be their natural look. Numbers outside this range may look
weird (#97) - Added
weight
andmode
arguments toget_con()
that are passed on to the
shortest path calculations (#89). - Add matrix layout and
geom_edge_point()
(#23) - Added
geom_edge_tile()
for use with matrix layouts (#141) - Manual layouts are now easier to specify. You can pass a matrix or data.frame
to the layout parameter that will then be used. Also, if anx
andy
argument is present, theauto
layout will choose themanual
layout. (#91) - Custom layout functions are now much more flexible. And can either return a
data.frame
or an object coercible to atbl_graph
. In the latter case the
node table will be used as layout and the graph will be attached. This allows
direct use of the particles package as a layout engine as a side effect. (#88)
Bug fixes
- Fixed numerious bugs and issues pertaining to the group aesthetic handling in
many edge geoms (#190, #193). - Edge geoms no longer throws an error when all edges are completely capped
(#176) - Fixed a bug that prevented edge capping from being used with *2 variants of
edge geoms (#167) - Fix bug in edge capping that could lead to edges extending to (0,0) (#163)
- Fix bug affecting faceting of capped edges (#140)
- Character aesthetics are no longer cast to factors in edge geoms (#131)
- Fix a bug where start capping was ignored if the previous edge had been
completely removed by capping (#150) - Fix offsetting bug in edge label drawing when some labels are empty strings
andlabel_parse = TRUE
(#159) - Fixed a bug resulting in the wrong mapping of additional values to connections
(#122, #134) - Fixed a bug when using
facet_graph()
with data from both tbl_df and
data.frame - Added
override.aes
toguide_edge_direction()
- Fix bug with extracting edges from an empty graph (#76)
- Fixed bug causing shifts in edge aesthetics when one or more edges were
completely clipped (#62, #115) - Fixed bug when clipping completely orthogonal points that produced additional
lines going to (0,0) (#70, #84, #103)
Other
- Changed license to MIT
- Update roxygen documentation to use markdown and reduce duplication (#95)