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visNanopub

Overview

This is an R script that generates a JavaScript visualization for Nanopublications. Nanopublications are small knowledge graph snippets. I believe that knowledge graphs hold a great deal of potential to bridge knowledge gaps, but tend to be a little tough to work with without technical expertise.

This script is a starting point. It has lots of to-dos:

  • It's a bit messy still and the URI is not clickable.
  • Convert into a Shiny app that allows people to input their Nanopublication URI.
  • Enable functionality for multiple Nanopublications, which would show linkages between them.
  • Just clean it up - I'm not a great coder, so there's lots of messy stuff in here.

Please reach out if you can/want to help!

Screenshot 2024-07-12 145003

Acknowledgments

Big thanks to Katya Ognyanova for providing this excellent tutorial on network visualizations: https://kateto.net/network-visualization

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An R script that visualizes Nanopublications.

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