This repository provides code implementation for explainning the metabolic interaction in the SeMeCo framework.
Each folder stores the following:
Slides: A theoretical description of this research.docear: Concept maps related to main topics in SeMeCo and cooperative models.figures: Most illustrative figures referred in this research.
Fig. 1: Illustration of a Protrophic cell used in the SeMeCo experiment.
[1]: K. Campbell et al., “Self-establishing communities enable cooperative metabolite exchange in a eukaryote,” eLife, vol. 4, p. e09943, Oct. 2015. . Link to paper in Nature Microbiology
[2]: K. Campbell, C. Correia-Melo, and M. Ralser, “Self-Establishing Communities: A Yeast Model to Study the Physiological Impact of Metabolic Cooperation in Eukaryotic Cells,” in Yeast Systems Biology: Methods and Protocols, S. G. Oliver and J. I. Castrillo, Eds., New York, NY: Springer, 2019, pp. 263–282. Link to book chapter in Springer Nature Link