Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
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Updated
Nov 19, 2024 - Jupyter Notebook
#
direct-rna-sequencing
Here are 8 public repositories matching this topic...
Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files
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Apr 4, 2024 - R
An awesome Oxford Nanopore Pipeline for direct RNA-sequencing
bioinformatics
quality-control
pipeline
singularity
alternative-splicing-analysis
transcriptomics
oxford-nanopore
rna-editing
differential-expression-analysis
snakemake-pipeline
novel-transcripts
rna-modifications
direct-rna-sequencing
known-transcripts
polya-tail-length-estimation
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Feb 6, 2024 - Python
tool for long read transcriptome assembly
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Aug 24, 2023 - Jupyter Notebook
Transcriptome-wide analysis of mRNA adenylation status in yeast using nanopore sequencing - materials accompanying the methods chapter
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Jan 30, 2023 - TeX
Demo data repo for workflow or function test
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Jan 16, 2023
Nanopore based RNA-Seq pipeline for viral samples
influenza
oxford-nanopore
rna-seq-pipeline
nanopore-sequencing
covid-19
sars-cov-2
direct-rna-sequencing
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Updated
Apr 6, 2020
RNA Modification Detection using Nanopore Direct RNA Sequencing via improved Transformer
interpretability
nanopore-sequencing
multiple-instance-learning
direct-rna-sequencing
rna-modification
modification-detection
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Updated
Oct 11, 2024 - Jupyter Notebook
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