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AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linear Dimensionality Reduction on Extracellular Waveforms Reveals Physiological, Functional, and Laminar Diversity in Premotor Cortex.
This project is as part of a workshop in Analysis of Biological Networks, instructed by Prof. Roded Sharan and Shani Jacobson. The workshop aims to improve existing algorithms for community detection in networks.
Data and code to Estévez & Takács (2022) 'Brokering or sitting between two chairs? A group perspective on workplace gossip'. Frontiers in Psychology, 13: 815383.
Part of Python for Scientific Computing Special Topic Trinity 2021, MSc Mathematical Modelling and Scientific Computing, University of Oxford. Experimental modification of Thomas Aynaud's package python-louvain to include spatial effects.