splice-junctions
Here are 13 public repositories matching this topic...
Splice junction analysis and filtering from BAM files
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Mar 31, 2022 - C++
✂️ Deep learning-based splice site predictor that improves spliced alignments
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May 5, 2024 - C++
Integrative Pipeline for Splicing Analyses (IPSA) in Nextflow
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Jul 19, 2019 - Perl
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Jan 25, 2018 - R
Toolkit and pipeline for processing short- and long-read RNA sequencing data.
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Sep 5, 2022 - Jupyter Notebook
Deep neural network for splice sites prediction
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Jun 6, 2022 - Jupyter Notebook
Comparison of the ability of open reading frames to recruit ribosomes within individual transcripts
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May 21, 2021 - Python
Splicing assembly for non-model organisms using RNAseq data
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May 9, 2023 - Python
This repository provides scripts for RNA-Seq data analysis using JunctionSeq and QoRTs, enabling quality control, differential splicing analysis, and generation of browser tracks.
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Jun 7, 2023 - R
Classification of Splice Junction sites using Neural Networks with Python and Keras
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Dec 6, 2021 - Jupyter Notebook
A tool to create sequences for primers targeting exon-exon splice junctions
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Jun 30, 2023 - Python
Code for the manuscript "Splicing accuracy varies across human introns, tissues and age".
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Jul 22, 2024 - HTML
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