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Tapas 3.3.0

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@TNU-yaoy TNU-yaoy released this 21 Jul 14:40
· 555 commits to master since this release
45beaf2

Version 3.3.0

This version contains new features and bugfixes for HGF, PhysIO, SEM and HUGE

Added

  • h2gf: Hierarchical inference for the HGF, beta version released
  • SERIA: Added the Watanabe Akaike information criterion (WAIC) as output.
  • SERIA: Added computation of early and late response likelihood.
  • SERIA: Added delta plots to output summary.

Changed

  • HGF: v6.0 released
  • SERIA: The constraints matrix is now automatically plot by
    tapas_sem_\display_posterior.m
  • SERIA: Python code is now updated to python 3.7 and the requirement file
    now uses the latest libraries (numpy, scipy, cython).
  • SERIA: Posterior plots includes fits of the complete group.
  • SERIA: Summaries are automatically generated when preparing the posterior.
  • PhysIO: PhysIO Toolbox Release R2020a, v7.3.0
  • PhysIO: removed Matlab statistics toolbox dependency for PCA by SVD implementation (thanks to Benoît Beranger, pull request 64)

Fixed

  • HUGE: fixed tick labels

Known issues

  • TAPAS uses the mcmcdiag toolbox for Monte Carlo convergence diagnostics, which shadows a number of matlab built-in functions. Affected functions include: Contents.m, cusum.m, join.m and score.m. Workaround: If you use one of these functions in your own code, remove the tapas folder from your matlab path when you are not using the TAPAS toolbox.