Protein Representation Learning with Sequence Information Embedding: Does it Always Lead to a Better Performance?
Using structure information only for protein homology detection.
- [2024.08.22] Congratulations! Our paper was accepted as a short paper at IEEE International Conference on Bioinformatics and Biomedicine 2024 (IEEE BIBM 2024)!
Please make sure you have installed Anaconda3 or Miniconda3.
conda env create -f environment.yaml
conda activate protlocaScript example can be found at script/.
Please cite our work if you have used our code or data. We are pleased to see improvements in the subsequent work.
@article{tan2024protloca,
title={Protein Representation Learning with Sequence Information Embedding: Does it Always Lead to a Better Performance?},
author={Tan, Yang and Zheng, Lirong and Zhong, Bozitao and Hong, Liang and Zhou, Bingxin},
journal={arXiv preprint arXiv:2406.19755},
year={2024}
}