A "slim" build of jupyter notebook images
docker compose -f ./jupytersuperslim.yaml up
Then connect to http://localhost:9888/lw-workspace/proxy/
manifestFolder="$whatever/cdis-manifest/your.commons/manifests/hatchery"
cp jupyterslim.yaml "$manifestFolder/"
appdata="$(
cat - <<EOM
{
"type": "dockstore-compose:1.0.0",
"path": "/hatchery-more-configs/jupyterslim.yaml",
"name": "Gen3_Slim_Jupyter_Notebook"
}
EOM
)"
if jq --argjson appdata "$appdata" '.["more-configs"] |= . + [$appdata]' < "$manifestFolder/hatchery.json" > "$manifestFolder/hatcheryNew.json"; then
mv "$manifestFolder/hatcheryNew.json" "$manifestFolder/hatchery.json"
fi
Run jupyter --version
in a terminal to get version information:
$ jupyter --version
jupyter core : 4.6.3
jupyter-notebook : 6.0.3
qtconsole : not installed
ipython : 7.15.0
ipykernel : 5.3.0
jupyter client : 6.1.3
jupyter lab : 2.1.3
nbconvert : 5.6.1
ipywidgets : 7.5.1
nbformat : 5.0.6
traitlets : 4.3.3
Note: the versions shown above may not apply to current image versions.