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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(read,File)
export(BcftoolsStatsFile)
export(BclconvertReports)
export(BclconvertReports375)
export(File)
export(MultiqcFile)
export(Wf)
export(Wf_dragen)
export(Wf_sash)
export(Wf_sash_download_tidy_write)
export(Wf_tso_ctdna_tumor_only)
export(Wf_tso_ctdna_tumor_only_v2)
export(Wf_umccrise)
export(Wf_umccrise_download_tidy_write)
export(bcftools_parse_vcf)
export(bcftools_parse_vcf_regions)
export(date_log)
export(dr_func_eval)
export(dr_output_format_valid)
export(dr_s3_download)
export(dragen_cnv_metrics_read)
export(dragen_coverage_metrics_read)
export(dragen_fastqc_metrics_read)
export(dragen_gc_metrics_read)
export(dragen_mapping_metrics_read)
export(dragen_sv_metrics_read)
export(dragen_trimmer_metrics_read)
export(dragen_umi_metrics_read)
export(dragen_vc_metrics_read)
export(dtw_Wf_dragen)
export(dtw_Wf_tso_ctdna_tumor_only)
export(dtw_Wf_tso_ctdna_tumor_only_v2)
export(empty_tbl)
export(file_regex_getter)
export(grep_file)
export(local_list_files_dir)
export(local_list_files_filter_relevant)
export(match_regex)
export(multiqc_column_map_append)
export(multiqc_date_fmt)
export(multiqc_parse_bargraph_plot)
export(multiqc_parse_gen)
export(multiqc_parse_plots)
export(multiqc_parse_raw)
export(multiqc_parse_raw_interop)
export(multiqc_parse_xyline_plot)
export(multiqc_parse_xyline_plot_contig_cvg)
export(multiqc_tidy_json)
export(pcgr_json_read)
export(rdf2tab)
export(read)
export(s3_file_presignedurl)
export(s3_list_files_dir)
export(s3_list_files_filter_relevant)
export(s3_search)
export(session_info_kable)
export(tidy_files)
export(tso_acfc_plot)
export(tso_acfc_read)
export(tso_combinedvaro_smallv_read)
export(tso_fusions_read)
export(tso_msi_read)
export(tso_sar_read)
export(tso_targetregcvg_plot)
export(tso_targetregcvg_read)
export(tso_tmbt_read)
export(umccr_tidy)
export(write_dracarys_list_of_tbls)
importFrom(R6,R6Class)
importFrom(glue,glue)
importFrom(rlang,"!!!")
importFrom(rlang,"%||%")
importFrom(rlang,.data)