Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Implement BCLConvert InteropQC workflow #148

Closed
alexiswl opened this issue Mar 12, 2024 · 1 comment · Fixed by #337
Closed

Implement BCLConvert InteropQC workflow #148

alexiswl opened this issue Mar 12, 2024 · 1 comment · Fixed by #337
Assignees
Labels
feature New feature pipeline Workflow/Pipeline Manager

Comments

@alexiswl
Copy link
Member

bclconvert-interop-qc is a tiny pipeline service to be triggered after the successful completion of the bssh fastq copy manager service

The interop qc workflow is shown here - https://github.com/umccr/cwl-ica/releases/tag/bclconvert-interop-qc%2F1.3.1--1.19__202403122095003

This will mean I can focus on (without accidentally deploying 100 cttso v2 workflows)

  • Event handling
  • Database handling, updating states, entries etc.

We can then move this logic into (#145) as well and any future pipelines such as tumor-normal, alignment qc, wts etc

@alexiswl alexiswl added the feature New feature label Mar 12, 2024
@alexiswl alexiswl self-assigned this Mar 12, 2024
@victorskl victorskl added the pipeline Workflow/Pipeline Manager label Mar 12, 2024
@victorskl
Copy link
Member

Alexis has started the work item on the branch feature/bclconvert-interop-qc-manager

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
feature New feature pipeline Workflow/Pipeline Manager
Projects
None yet
2 participants