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Build ora compression service #533

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alexiswl opened this issue Sep 4, 2024 · 0 comments · Fixed by #624
Closed

Build ora compression service #533

alexiswl opened this issue Sep 4, 2024 · 0 comments · Fixed by #624
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feature New feature pipeline Workflow/Pipeline Manager

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@alexiswl
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alexiswl commented Sep 4, 2024

Ora compression service will use the workflow run state change read event as an input type where the inputs will require a s3 or icav2 uri to a workflow input.

The output will contain the fastq list rows in a gzip compression format where read1FileUri and read2FileUri will be s3 ora paths.
The fastq list row format will be extended to provide an md5sum attribute of both the ora file and the original gzipped fastq file.

@alexiswl alexiswl added the feature New feature label Sep 4, 2024
@alexiswl alexiswl self-assigned this Sep 4, 2024
@victorskl victorskl added the pipeline Workflow/Pipeline Manager label Sep 4, 2024
@victorskl victorskl linked a pull request Nov 1, 2024 that will close this issue
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