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Create lambda for running RNASums #689

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alexiswl opened this issue Nov 13, 2024 · 1 comment · Fixed by #692
Closed

Create lambda for running RNASums #689

alexiswl opened this issue Nov 13, 2024 · 1 comment · Fixed by #692
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feature New feature pipeline Workflow/Pipeline Manager

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@alexiswl
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alexiswl commented Nov 13, 2024

Something for the new 'button' to trigger.

Given a subject id, and a dataset, generate a ready event for RNASum using the latest version of UMCCRise and WTS for a given subject

Update: Given a portal run id (of an existing RNASum event), and a dataset id, find the READY event from the workflow manager and then perform a find-replace on all existing versions of that old portal run id with a new portal run id.
For the new WorkflowRunStateChange READY event, remove the payload.refId attribute and refresh the 'timestamp' attribute with the current UTC time

@alexiswl alexiswl added the feature New feature label Nov 13, 2024
@alexiswl alexiswl self-assigned this Nov 13, 2024
@victorskl victorskl added the pipeline Workflow/Pipeline Manager label Nov 13, 2024
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Related umccr/orca-ui#74

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