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Feat/remove vtk from scalismo#420

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madsendennis merged 97 commits intounibas-gravis:release-1.0unibas-gravis/scalismo:release-1.0from madsendennis:feat/remove-vtkmadsendennis/scalismo:feat/remove-vtkCopy head branch name to clipboardJan 26, 2024

+413-154,534

Commits

Commits on Jan 5, 2024

• feat: initial scala version of simplifymesh from java

  

  dennis.madsen

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Commits on Jan 7, 2024

• misc: flipped negated condition and condition order

  

  dennis.madsen

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• misc: changed test path to relative

  

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• fix: fixed loop breaking by converting to while loops instead of for

  

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• chore: removed item lookup from updates

  

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Commits on Jan 8, 2024

• feat: remove vtk dependency to calculate tetrahedron volume

  

  dennis.madsen

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• refactor: move determinant object to separate file under numerics

  

  dennis.madsen

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• feat: native ply writer implementation (20 times faster than VTK)

  

  dennis.madsen

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• wip

  

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Commits on Jan 9, 2024

• feat: native ply binary reader for triangleMesh

  

  dennis.madsen

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• refactor: update bin reader to use ByteBuffer instead of DataStream

  

  dennis.madsen

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• refactor: moved header check logic to header parser

  

  dennis.madsen

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Commits on Jan 10, 2024

• feat: added writing support of VertexColorMesh3D

  

  dennis.madsen

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• feat: added reading support for VertexColorMesh

  

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• feat: added support for ascii format

  

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• refactor: reordered function order in file

  

  dennis.madsen

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• feat: changed vtk usage with native ply read/writing

  

  dennis.madsen

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• misc: todo comment

  

  dennis.madsen

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• feat: added ply read/writer files from scalismo.faces

  

  dennis.madsen

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• misc: initial stl writer files

  

  dennis.madsen

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Commits on Jan 11, 2024

• feat: simple binary stl writer added

  

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• feat: simple binary stl reader added

  

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• feat: simple ascii stl reader added

  

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Commits on Jan 12, 2024

• misc: fix return types

  

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  874b8de

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• reformatting

  

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• formatting: adding headers

  

  dennis.madsen

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• fix: int to uchar

  

  dennis.madsen

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• fix: added support for missing datatypes in scalismo-faces ply reader

  

  dennis.madsen

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Commits on Jan 15, 2024

• misc: updated face validation to only accept vertix_indices property

  

  dennis.madsen

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Commits on Jan 16, 2024

• fix: wrong import + removed vtk import

  

  dennis.madsen

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• Merge branch 'feat/native-stl-io' into feat/remove-vtk

  

  dennis.madsen

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• Merge branch 'feat/native-ply-io' into feat/remove-vtk

  

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• Merge branch 'feat/mesh-decimation' into feat/remove-vtk

  

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• chore: removed vtk decimation

  

  dennis.madsen

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• chore: removed conversion to/from vtk format

  

  dennis.madsen

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• chore: moved vtk dependency as test

  

  dennis.madsen

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• chore: removed vtk from meshio

  

  dennis.madsen

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• chore: removed vtk from imageio

  

  dennis.madsen

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• chore: removed vtk from meshoperations

  

  dennis.madsen

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• chore: removed vtk from scalardatatype

  

  dennis.madsen

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• chore: removed scalismo initialize

  

  dennis.madsen

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• chore: removed discrete image filter as it relies on vtk

  

  dennis.madsen

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• chore: removed vtk initialization in tests

  

  dennis.madsen

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• misc: .gitignore updated with ds store (mac file)

  

  dennis.madsen

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• chore: updated transformation test to use nifti reader

  

  dennis.madsen

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• chore: updated to use nifti reader directly + moved vtk tests to vtk lib

  

  dennis.madsen

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• chore: moved vtk dependent tests to scalismo vtk

  

  dennis.madsen

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• chore: moved vtk dependent test from meshiotests to scalismo-vtk

  

  dennis.madsen

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• chore: moved vtk dependent tests from mesh tests to scalismo vtk

  

  dennis.madsen

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• chore: set nifti reader parameter with default value

  

  dennis.madsen

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• chore: moved vtk dependent tests from registration, asm and utils to scalismo-vtk

  

  dennis.madsen

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• chore: removed vtk from sbt file

  

  dennis.madsen

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• chore: removed vtk from barycentric test

  

  dennis.madsen

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• misc: update function reference in test

  

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• misc: updated repo version

  

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• chore: removed unused resources

  

  dennis.madsen

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• fix: decimation vertices to triangle estimation

  

  dennis.madsen

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• chore: removed timing and prints from test + removed temporary java version and dependencies

  

  dennis.madsen

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• feat: added alternative ply face name

  

  dennis.madsen

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Commits on Jan 21, 2024

• misc: added err matrix initialization

  

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Commits on Jan 22, 2024

• chore: removed unused functions

  

  dennis.madsen

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• fix: normal calculation in mesh update

  

  dennis.madsen

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• Feat/native stl io (unibas-gravis#419)

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• Feat/native ply io (unibas-gravis#418)

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• Feat/gp map (unibas-gravis#422)

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• misc: initial stl writer files

  

  dennis.madsen

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• feat: simple binary stl writer added

  

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  48227fe

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• feat: simple binary stl reader added

  

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  committed
  a118f33

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• misc: fix return types

  

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  committed
  daac3df

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• reformatting

  

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  2b2240e

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• formatting: adding headers

  

  dennis.madsen

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  be2141d

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• feat: changed vtk usage with native ply read/writing

  

  dennis.madsen

  committed
  afe4b54

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• misc: updated face validation to only accept vertix_indices property

  

  dennis.madsen

  committed
  2096d42

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• chore: removed vtk initialization in tests

  

  dennis.madsen

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• misc: files removed

  

  dennis.madsen

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• chore: remove vtk from meshio file after rebase

  

  dennis.madsen

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• chore: remove vtk from meshiotests after rebase

  

  dennis.madsen

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• chore: remove asm from scalismo

  

  dennis.madsen

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• Merge branch 'feat/mesh-decimation' into feat/remove-vtk

  

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• chore: outcommented code removed from tests

  

  dennis.madsen

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• misc: bump version to 1.0.0, intended release version of scalismo with no vtk and no asm

  

  dennis.madsen

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• misc: undo automatic file import cleanup

  

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Commits on Jan 26, 2024

• removed further ghost files

  Andreas-Forster

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• use jdk 11 for running tests

  

  marcelluethi

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• specify jdk distribution

  

  marcelluethi

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• Feat/native mesh decimation (unibas-gravis#416)

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  2 peopleauthored and

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• misc: initial stl writer files

  

  dennis.madsen

  committed
  ba20904

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• feat: simple binary stl reader added

  

  [email protected]

  committed
  68d15b5

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• feat: initial scala version of simplifymesh from java

  

  dennis.madsen

  committed
  4009d46

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• chore: outcommented code removed from tests

  

  dennis.madsen

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• chore: fix rebase conflicts

  

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  d15a090

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• formatting: scalafmt

  

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• misc: streamline file reader interface and naming

  

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• Merge branch 'release-1.0' into feat/remove-vtk

  

  Dennis Madsen

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• formatting: minor

  

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• chore: removed unused java file

  

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• removed ghost copy of file

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