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Merge pull request #1772 from usegalaxy-au/cat-bro-patch-26-1
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reduce fgenesh and allow maxquant to run on fgenesh VM
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cat-bro authored Feb 9, 2024
2 parents 450b0d5 + ac70e8c commit 3c4b640
Showing 1 changed file with 12 additions and 1 deletion.
Original file line number Diff line number Diff line change
Expand Up @@ -981,6 +981,17 @@ tools:
max_concurrent_job_count_for_tool_user: 2
cores: 16
mem: 61.4
scheduling:
accept:
- pulsar
- pulsar-high-mem2 # TODO: Allowing pulsar-mel2 is temporary for crowd control on a busy day - this might not be a good spot for maxquant long term
rules:
- id: maxquant_singularity_rule
if: |
minimum_singularity_version = '2.0.3.0+galaxy0'
helpers.tool_version_gte(tool, minimum_singularity_version)
params:
singularity_enabled: true
toolshed.g2.bx.psu.edu/repos/galaxyp/maxquant/maxquant_mqpar/.*:
cores: 16
mem: 61.4
Expand Down Expand Up @@ -3022,7 +3033,7 @@ tools:
fail: Your account has not been given access to cellranger. Contact [email protected]
if you think this is in error.
^fgenesh$:
cores: 120
cores: 60
mem: 20
params:
singularity_enabled: true
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