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Dorado bump #120

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Aug 6, 2024
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2 changes: 1 addition & 1 deletion tools/dorado/.shed.yml
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ long_description: >
Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads.
name: dorado
owner: galaxy-australia
remote_repository_url: https://github.com/usegalaxy-au/tools-au/tree/main/tools/dorado
remote_repository_url: https://github.com/usegalaxy-au/tools-au/tree/master/tools/dorado
suite:
name: suite_dorado
description: >
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2 changes: 1 addition & 1 deletion tools/dorado/README.md
Original file line number Diff line number Diff line change
Expand Up @@ -43,6 +43,6 @@ The loc file doesn't have a header, so you can keep it sorted.
cp tool-data/dorado_models.loc.sample \
tool-data/dorado_models.loc.sample.old &&
sort -t$'\t' -k1,1V tool-data/dorado_models.loc.sample.old \
> tool-data/dorado_models.loc
> tool-data/dorado_models.loc.sample
```

4 changes: 2 additions & 2 deletions tools/dorado/macros.xml
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
<macros>
<!-- UPDATING: pull the latest container and check the version. Update both tokens. You MUST also update the model list. See README.md for more. -->
<token name="@VERSION@">0.7.2+9ac85c6</token>
<token name="@CONTAINER_HASH@">58b978562389bd0f1842601fb83cdf1eb2920218</token>
<token name="@VERSION@">0.7.3+6e6c45c</token>
<token name="@CONTAINER_HASH@">4fa3fd6a5b5ed1b6256500c4368f7dae9c43df97</token>
<xml name="requirements">
<requirements>
<container type="docker">nanoporetech/dorado:sha@CONTAINER_HASH@</container>
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