Jenkins install build 1359.

usegalaxy-au · Nov 30, 2023 · 0282531 · 0282531
1 parent 2f1b89b
commit 0282531
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diff --git a/automated_tool_installation_log.tsv b/automated_tool_installation_log.tsv
@@ -6050,3 +6050,4 @@ Update	174	29/11/23 19:50:28	scanpy_cluster_reduce_dimension	False	Tests failed
 Update	174	29/11/23 20:00:53	scanpy_filter	False	Tests failed	iuc	a03ff8633507	a03ff8633507	Staging Testing	7/8		Single-cell	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_174/install_log.txt
 Update	174	29/11/23 20:06:28	scanpy_normalize	False	Tests failed	iuc	94c19fb1281c	94c19fb1281c	Staging Testing	2/4		Single-cell	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_174/install_log.txt
 Update	174	29/11/23 21:06:03	split_file_to_collection	False	Installed	bgruening	baabc30154cd	baabc30154cd		19/19	19/19	Collection Operations	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_174/install_log.txt
+Install	1359	01/12/23 06:46:26	seq_filter_by_id	False	Tests failed	peterjc	83a19df00eab	83a19df00eab	Staging Testing	2/6		Filter and Sort	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1359/install_log.txt
diff --git a/requests/seq_filter_by_id.yml b/requests/seq_filter_by_id.yml
diff --git a/staging.gvl.org.au/annotation.yml b/staging.gvl.org.au/annotation.yml
@@ -2,11 +2,11 @@ tools:
 - name: abricate
   owner: iuc
   revisions:
+  - 6e9aea89e388
+  - 3f3e247c053d
   - c2ef298da409
-  - 78c75f134c16
   - 4efdca267d51
-  - 3f3e247c053d
-  - 6e9aea89e388
+  - 78c75f134c16
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: aegean_canongff3
@@ -36,15 +36,15 @@ tools:
 - name: annotatemyids
   owner: iuc
   revisions:
-  - cd2480f35935
-  - f29602ae449e
-  - 4f2967b27e67
-  - b5d8e5475247
-  - 3e1f6f6d557e
+  - 133f36c29579
   - fe3ca740a485
+  - b5d8e5475247
   - 1aae04680c4b
-  - 133f36c29579
+  - f29602ae449e
+  - 3e1f6f6d557e
+  - 4f2967b27e67
   - 44018dd6b447
+  - cd2480f35935
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: antismash
@@ -57,17 +57,17 @@ tools:
 - name: augustus_training
   owner: bgruening
   revisions:
+  - dc027fa56d55
   - 7be22100e5e1
   - 6519ebe25019
-  - dc027fa56d55
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: augustus
   owner: bgruening
   revisions:
+  - 28433faa6e42
   - 09855551d713
   - ca6d970d931c
-  - 28433faa6e42
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: bakta
@@ -79,9 +79,9 @@ tools:
 - name: barrnap
   owner: iuc
   revisions:
-  - fe48aa4ccd5e
-  - 8fd427007e93
   - 7355bbf5e05f
+  - 8fd427007e93
+  - fe48aa4ccd5e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: chipseeker
@@ -99,9 +99,9 @@ tools:
 - name: eggnog_mapper
   owner: galaxyp
   revisions:
+  - 63662ae295d6
   - 9d1fbff733cf
   - d9c3016f7283
-  - 63662ae295d6
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: exonerate
@@ -119,49 +119,49 @@ tools:
 - name: funannotate_annotate
   owner: iuc
   revisions:
-  - b6b5cd37f2a2
+  - 14f588312c56
   - 582fd74dc2a1
+  - b6b5cd37f2a2
   - 9f2455341fac
-  - 14f588312c56
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_clean
   owner: iuc
   revisions:
-  - a230ea445788
-  - 0ffe5be70caf
   - 30fb23d4c31c
-  - 73428a792541
   - 989f7c061f35
+  - a230ea445788
+  - 73428a792541
+  - 0ffe5be70caf
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_compare
   owner: iuc
   revisions:
-  - 30f08d74024f
   - 494f0bb4a993
-  - 5a5ae61da69c
   - 563a19373357
+  - 5a5ae61da69c
+  - 30f08d74024f
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_predict
   owner: iuc
   revisions:
-  - 1bc5a03faf2e
   - 2bba2ff070d9
-  - d6c7106b7b2e
   - 7abc5f6dd595
+  - d6c7106b7b2e
   - f31125bb85ea
+  - 1bc5a03faf2e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_sort
   owner: iuc
   revisions:
   - 54961e026fe4
-  - d3af38b9c7e1
+  - b3cf4684e9c7
   - 52af33194019
   - 520e30695ec3
-  - b3cf4684e9c7
+  - d3af38b9c7e1
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: get_orfs_or_cdss
@@ -174,8 +174,8 @@ tools:
   owner: iuc
   revisions:
   - 79261884facd
-  - 2aea122fbd25
   - 07d7991bf205
+  - 2aea122fbd25
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goenrichment
@@ -187,10 +187,10 @@ tools:
 - name: goseq
   owner: iuc
   revisions:
+  - 602de62d995b
   - 8b3e3657034e
   - ef2ad746b589
   - 43798b4caee0
-  - 602de62d995b
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goslimmer
@@ -276,9 +276,9 @@ tools:
   owner: crs4
   revisions:
   - a17498c603ec
-  - 8a22554cdde2
   - eaee459f3d69
   - bf68eb663bc3
+  - 8a22554cdde2
   - d643e3b03500
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -291,8 +291,8 @@ tools:
 - name: repeat_masker
   owner: bgruening
   revisions:
-  - ba6d2c32f797
   - 3f987772e283
+  - ba6d2c32f797
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: repeatmodeler
@@ -312,21 +312,21 @@ tools:
   owner: iuc
   revisions:
   - 5b80f544c67f
+  - 268d162b9c49
   - 8f92c2b26e6d
+  - cfcf33df7fc0
   - 68693743661e
-  - 5a29ab10dba6
   - 5c7b70713fb5
-  - cfcf33df7fc0
   - 9473cd297a76
-  - 268d162b9c49
+  - 5a29ab10dba6
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snpsift
   owner: iuc
   revisions:
   - 5fab4f81391d
-  - 2b3e65a4252f
   - 09d6806c609e
+  - 2b3e65a4252f
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snptools
@@ -351,15 +351,15 @@ tools:
 - name: tbprofiler
   owner: iuc
   revisions:
-  - ba6f87115e13
+  - ac8250086ac3
   - e1a9d6fd258d
+  - 45083d070fb8
+  - 200c378d85f3
+  - 809dfc93d593
   - 037a11682176
-  - ac8250086ac3
   - 37213cf56392
-  - 809dfc93d593
   - 2c68b0c38785
-  - 200c378d85f3
-  - 45083d070fb8
+  - ba6f87115e13
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: transit_gumbel