Jenkins install build 1374.

usegalaxy-au · Dec 17, 2023 · 3d068f4 · 3d068f4
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diff --git a/automated_tool_installation_log.tsv b/automated_tool_installation_log.tsv
@@ -6107,3 +6107,4 @@ Update	176	14/12/23 12:36:10	openms_xmlvalidator	False	Tests failed	galaxyp	f036
 Update	176	14/12/23 12:52:35	sample_seqs	False	Tests failed	peterjc	bdaefd241921	bdaefd241921	Staging Testing	12/16		Filter and Sort	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_176/install_log.txt
 Update	176	14/12/23 12:59:55	samtools_split	False	Tests failed	devteam	bd850490c7f1	bd850490c7f1	Production Testing	1/1	0/1	SAM/BAM	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_176/install_log.txt
 Update	176	14/12/23 15:41:55	seqtk	False	Installed	iuc	4b494533146a	4b494533146a		33/33	0/0	FASTA/FASTQ	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_176/install_log.txt
+Install	1374	18/12/23 09:41:41	geneiobio	True	Installed	iuc	fc53fcdbe548	fc53fcdbe548		2/2	2/2	Graph/Display Data	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1374/install_log.txt
diff --git a/requests/geneiobio.yml b/requests/geneiobio.yml
diff --git a/staging.gvl.org.au/annotation.yml b/staging.gvl.org.au/annotation.yml
@@ -2,11 +2,11 @@ tools:
 - name: abricate
   owner: iuc
   revisions:
+  - 4efdca267d51
   - c2ef298da409
   - 6e9aea89e388
-  - 3f3e247c053d
-  - 4efdca267d51
   - 78c75f134c16
+  - 3f3e247c053d
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: aegean_canongff3
@@ -36,15 +36,15 @@ tools:
 - name: annotatemyids
   owner: iuc
   revisions:
-  - 44018dd6b447
   - fe3ca740a485
-  - 4f2967b27e67
-  - 3e1f6f6d557e
-  - b5d8e5475247
-  - cd2480f35935
-  - f29602ae449e
   - 133f36c29579
+  - 44018dd6b447
   - 1aae04680c4b
+  - cd2480f35935
+  - b5d8e5475247
+  - f29602ae449e
+  - 4f2967b27e67
+  - 3e1f6f6d557e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: antismash
@@ -58,15 +58,15 @@ tools:
   owner: bgruening
   revisions:
   - dc027fa56d55
-  - 6519ebe25019
   - 7be22100e5e1
+  - 6519ebe25019
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: augustus
   owner: bgruening
   revisions:
-  - 09855551d713
   - 28433faa6e42
+  - 09855551d713
   - ca6d970d931c
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -106,8 +106,8 @@ tools:
 - name: eggnog_mapper
   owner: galaxyp
   revisions:
-  - d9c3016f7283
   - 63662ae295d6
+  - d9c3016f7283
   - 9d1fbff733cf
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -126,52 +126,52 @@ tools:
 - name: funannotate_annotate
   owner: iuc
   revisions:
-  - 3bbe70fef6df
-  - 9f2455341fac
   - 756376aeb1ae
+  - 3bbe70fef6df
   - 14f588312c56
-  - b6b5cd37f2a2
   - 582fd74dc2a1
+  - b6b5cd37f2a2
+  - 9f2455341fac
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_clean
   owner: iuc
   revisions:
-  - 73428a792541
-  - 30fb23d4c31c
-  - a230ea445788
   - 1691af4a0d17
-  - 0ffe5be70caf
   - 989f7c061f35
+  - a230ea445788
+  - 0ffe5be70caf
+  - 30fb23d4c31c
+  - 73428a792541
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_compare
   owner: iuc
   revisions:
   - 5a5ae61da69c
-  - 494f0bb4a993
   - 563a19373357
   - 30f08d74024f
   - e94187d661df
+  - 494f0bb4a993
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_predict
   owner: iuc
   revisions:
   - d6c7106b7b2e
-  - 1bc5a03faf2e
-  - 2bba2ff070d9
   - 7abc5f6dd595
+  - 2bba2ff070d9
+  - 1bc5a03faf2e
   - f31125bb85ea
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_sort
   owner: iuc
   revisions:
-  - 52af33194019
   - b3cf4684e9c7
-  - 54961e026fe4
   - d3af38b9c7e1
+  - 54961e026fe4
+  - 52af33194019
   - fed64e676186
   - 520e30695ec3
   tool_panel_section_label: Annotation
@@ -185,9 +185,9 @@ tools:
 - name: gff_to_prot
   owner: iuc
   revisions:
+  - 79261884facd
   - 07d7991bf205
   - 2aea122fbd25
-  - 79261884facd
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goenrichment
@@ -199,10 +199,10 @@ tools:
 - name: goseq
   owner: iuc
   revisions:
-  - 602de62d995b
   - 8b3e3657034e
   - ef2ad746b589
   - 43798b4caee0
+  - 602de62d995b
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goslimmer
@@ -227,8 +227,8 @@ tools:
 - name: interproscan
   owner: bgruening
   revisions:
-  - 74810db257cc
   - c55643c3d813
+  - 74810db257cc
   - 98cafcbd2578
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -247,23 +247,23 @@ tools:
 - name: maker_map_ids
   owner: iuc
   revisions:
-  - 326f9c294b09
   - e906fa778440
+  - 326f9c294b09
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: maker
   owner: iuc
   revisions:
+  - d46d803ca6cc
   - 3c1a01127868
   - 370c210d9541
-  - d46d803ca6cc
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: mitos2
   owner: iuc
   revisions:
-  - 033755194fe9
   - 624606f7c996
+  - 033755194fe9
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: mob_suite
@@ -287,11 +287,11 @@ tools:
 - name: prokka
   owner: crs4
   revisions:
+  - bf68eb663bc3
   - d643e3b03500
+  - eaee459f3d69
   - 8a22554cdde2
   - a17498c603ec
-  - eaee459f3d69
-  - bf68eb663bc3
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: red
@@ -303,8 +303,8 @@ tools:
 - name: repeat_masker
   owner: bgruening
   revisions:
-  - 3f987772e283
   - ba6d2c32f797
+  - 3f987772e283
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: repeatmodeler
@@ -323,22 +323,22 @@ tools:
 - name: snpeff
   owner: iuc
   revisions:
-  - 8f92c2b26e6d
-  - 9473cd297a76
-  - 5a29ab10dba6
   - 268d162b9c49
-  - 68693743661e
+  - 5c7b70713fb5
+  - 5a29ab10dba6
+  - 9473cd297a76
   - cfcf33df7fc0
+  - 68693743661e
   - 5b80f544c67f
-  - 5c7b70713fb5
+  - 8f92c2b26e6d
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snpsift
   owner: iuc
   revisions:
   - 2b3e65a4252f
-  - 5fab4f81391d
   - 09d6806c609e
+  - 5fab4f81391d
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snptools
@@ -363,14 +363,14 @@ tools:
 - name: tbprofiler
   owner: iuc
   revisions:
-  - ba6f87115e13
+  - 037a11682176
   - e1a9d6fd258d
-  - 37213cf56392
+  - ac8250086ac3
   - 45083d070fb8
-  - 809dfc93d593
-  - 037a11682176
+  - ba6f87115e13
   - 200c378d85f3
-  - ac8250086ac3
+  - 37213cf56392
+  - 809dfc93d593
   - 2c68b0c38785
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu