Jenkins install build 1380.

usegalaxy-au · Dec 20, 2023 · 7e887d7 · 7e887d7
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diff --git a/automated_tool_installation_log.tsv b/automated_tool_installation_log.tsv
@@ -6110,3 +6110,4 @@ Update	176	14/12/23 15:41:55	seqtk	False	Installed	iuc	4b494533146a	4b494533146a
 Install	1374	18/12/23 09:41:41	geneiobio	True	Installed	iuc	fc53fcdbe548	fc53fcdbe548		2/2	2/2	Graph/Display Data	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1374/install_log.txt
 Install	1376	18/12/23 11:47:34	windowmasker	True	Installed	iuc	d90ae4a02efd	d90ae4a02efd		11/11	11/11	Annotation	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1376/install_log.txt
 Install	1378	20/12/23 11:41:32	tetoolkit_tetranscripts	True	Tests failed	iuc	8e96d712a2bd	8e96d712a2bd	Production Testing	3/3	0/3	RNA-seq	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1378/install_log.txt
+Install	1380	20/12/23 11:57:01	tetoolkit_tetranscripts	True	Tests failed	iuc	8e96d712a2bd	8e96d712a2bd	Production Testing	3/3	0/3	RNA-seq	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1380/install_log.txt
diff --git a/requests/[email protected] b/requests/[email protected]
diff --git a/staging.gvl.org.au/annotation.yml b/staging.gvl.org.au/annotation.yml
@@ -2,11 +2,11 @@ tools:
 - name: abricate
   owner: iuc
   revisions:
-  - c2ef298da409
-  - 6e9aea89e388
+  - 4efdca267d51
   - 78c75f134c16
+  - 6e9aea89e388
+  - c2ef298da409
   - 3f3e247c053d
-  - 4efdca267d51
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: aegean_canongff3
@@ -36,30 +36,30 @@ tools:
 - name: annotatemyids
   owner: iuc
   revisions:
-  - fe3ca740a485
-  - 44018dd6b447
-  - 4f2967b27e67
   - 1aae04680c4b
+  - 133f36c29579
   - f29602ae449e
+  - b5d8e5475247
+  - 4f2967b27e67
+  - fe3ca740a485
+  - 44018dd6b447
   - 3e1f6f6d557e
   - cd2480f35935
-  - b5d8e5475247
-  - 133f36c29579
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: antismash
   owner: bgruening
   revisions:
-  - e78e25d3b4bd
   - bc88856eddab
+  - e78e25d3b4bd
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: augustus_training
   owner: bgruening
   revisions:
   - 7be22100e5e1
-  - 6519ebe25019
   - dc027fa56d55
+  - 6519ebe25019
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: augustus
@@ -79,9 +79,9 @@ tools:
 - name: barrnap
   owner: iuc
   revisions:
-  - 7355bbf5e05f
   - 8fd427007e93
   - fe48aa4ccd5e
+  - 7355bbf5e05f
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: braker3
@@ -93,8 +93,8 @@ tools:
 - name: chipseeker
   owner: rnateam
   revisions:
-  - 8bd92f2404dd
   - 1b9a9409831d
+  - 8bd92f2404dd
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: cpat
@@ -106,8 +106,8 @@ tools:
 - name: eggnog_mapper
   owner: galaxyp
   revisions:
-  - d9c3016f7283
   - 63662ae295d6
+  - d9c3016f7283
   - 9d1fbff733cf
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -126,43 +126,43 @@ tools:
 - name: funannotate_annotate
   owner: iuc
   revisions:
-  - 9f2455341fac
   - 582fd74dc2a1
-  - 3bbe70fef6df
   - 14f588312c56
-  - b6b5cd37f2a2
   - 756376aeb1ae
+  - 3bbe70fef6df
+  - 9f2455341fac
+  - b6b5cd37f2a2
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_clean
   owner: iuc
   revisions:
-  - 989f7c061f35
-  - 73428a792541
-  - 30fb23d4c31c
   - 0ffe5be70caf
   - a230ea445788
+  - 989f7c061f35
+  - 30fb23d4c31c
+  - 73428a792541
   - 1691af4a0d17
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_compare
   owner: iuc
   revisions:
   - 30f08d74024f
+  - 563a19373357
+  - 494f0bb4a993
   - e94187d661df
   - 5a5ae61da69c
-  - 494f0bb4a993
-  - 563a19373357
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_predict
   owner: iuc
   revisions:
-  - d6c7106b7b2e
-  - 2bba2ff070d9
+  - 7abc5f6dd595
   - 1bc5a03faf2e
+  - 2bba2ff070d9
   - f31125bb85ea
-  - 7abc5f6dd595
+  - d6c7106b7b2e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_sort
@@ -185,9 +185,9 @@ tools:
 - name: gff_to_prot
   owner: iuc
   revisions:
+  - 2aea122fbd25
   - 79261884facd
   - 07d7991bf205
-  - 2aea122fbd25
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goenrichment
@@ -199,10 +199,10 @@ tools:
 - name: goseq
   owner: iuc
   revisions:
-  - 8b3e3657034e
   - 43798b4caee0
   - ef2ad746b589
   - 602de62d995b
+  - 8b3e3657034e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goslimmer
@@ -228,8 +228,8 @@ tools:
   owner: bgruening
   revisions:
   - 74810db257cc
-  - 98cafcbd2578
   - c55643c3d813
+  - 98cafcbd2578
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: jcvi_gff_stats
@@ -247,15 +247,15 @@ tools:
 - name: maker_map_ids
   owner: iuc
   revisions:
-  - 326f9c294b09
   - e906fa778440
+  - 326f9c294b09
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: maker
   owner: iuc
   revisions:
-  - 370c210d9541
   - 3c1a01127868
+  - 370c210d9541
   - d46d803ca6cc
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -287,11 +287,11 @@ tools:
 - name: prokka
   owner: crs4
   revisions:
+  - a17498c603ec
   - eaee459f3d69
   - bf68eb663bc3
-  - a17498c603ec
-  - 8a22554cdde2
   - d643e3b03500
+  - 8a22554cdde2
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: red
@@ -303,15 +303,15 @@ tools:
 - name: repeat_masker
   owner: bgruening
   revisions:
-  - ba6d2c32f797
   - 3f987772e283
+  - ba6d2c32f797
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: repeatmodeler
   owner: csbl
   revisions:
-  - 41bfbaf3c959
   - 8661b2607b7e
+  - 41bfbaf3c959
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snap_training
@@ -323,22 +323,22 @@ tools:
 - name: snpeff
   owner: iuc
   revisions:
-  - 8f92c2b26e6d
-  - 5a29ab10dba6
-  - cfcf33df7fc0
   - 68693743661e
-  - 9473cd297a76
   - 268d162b9c49
   - 5b80f544c67f
+  - 8f92c2b26e6d
+  - cfcf33df7fc0
   - 5c7b70713fb5
+  - 5a29ab10dba6
+  - 9473cd297a76
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snpsift
   owner: iuc
   revisions:
+  - 09d6806c609e
   - 5fab4f81391d
   - 2b3e65a4252f
-  - 09d6806c609e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snptools
@@ -363,22 +363,22 @@ tools:
 - name: tbprofiler
   owner: iuc
   revisions:
-  - 037a11682176
-  - 45083d070fb8
-  - e1a9d6fd258d
   - 809dfc93d593
-  - ac8250086ac3
-  - ba6f87115e13
   - 37213cf56392
-  - 2c68b0c38785
   - 200c378d85f3
+  - 2c68b0c38785
+  - 037a11682176
+  - ac8250086ac3
+  - e1a9d6fd258d
+  - 45083d070fb8
+  - ba6f87115e13
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: transit_gumbel
   owner: iuc
   revisions:
-  - f50807720df1
   - 8fc50fe60127
+  - f50807720df1
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: trna_prediction