Jenkins install build 1630.

usegalaxy-au · Sep 24, 2024 · b36a810 · b36a810
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diff --git a/automated_tool_installation_log.tsv b/automated_tool_installation_log.tsv
@@ -7815,3 +7815,5 @@ Install	1628	23/09/24 11:57:23	checkm_taxon_set	True	Errored	iuc	407e50329077	la
 Install	1628	23/09/24 12:00:56	checkm_tetra	True	Installed	iuc	d0d9e52a46b8	latest		1/1		Metagenomic Analysis	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1628/install_log.txt
 Install	1628	23/09/24 12:06:53	checkm_tree	True	Installed	iuc	ce3fd529a6ec	latest		4/4		Metagenomic Analysis	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1628/install_log.txt
 Install	1628	23/09/24 12:12:56	checkm_tree_qa	True	Installed	iuc	36ea6d5441c3	latest		5/5		Metagenomic Analysis	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1628/install_log.txt
+Install	1630	24/09/24 14:07:43	checkm_taxonomy_wf	True	Installed	iuc	19e4e2d98ebb	latest				Metagenomic Analysis	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1630/install_log.txt
+Install	1630	24/09/24 14:08:33	checkm_taxon_set	True	Installed	iuc	407e50329077	latest				Metagenomic Analysis	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1630/install_log.txt
diff --git a/requests/[email protected] b/requests/[email protected]
diff --git a/staging.gvl.org.au/annotation.yml b/staging.gvl.org.au/annotation.yml
@@ -2,10 +2,10 @@ tools:
 - name: abricate
   owner: iuc
   revisions:
-  - 4efdca267d51
-  - 78c75f134c16
   - 6e9aea89e388
+  - 78c75f134c16
   - c2ef298da409
+  - 4efdca267d51
   - 3f3e247c053d
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -26,30 +26,30 @@ tools:
 - name: aegean_locuspocus
   owner: iuc
   revisions:
-  - c4ac24510b55
   - 1fdc517743e6
+  - c4ac24510b55
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: aegean_parseval
   owner: iuc
   revisions:
-  - d6c074a93c51
   - 1b52f0c8ad7f
+  - d6c074a93c51
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: annotatemyids
   owner: iuc
   revisions:
-  - cd2480f35935
-  - 4f2967b27e67
-  - 1aae04680c4b
   - f29602ae449e
+  - 3e1f6f6d557e
+  - b5d8e5475247
   - 133f36c29579
+  - 1aae04680c4b
   - a79ee60b6926
-  - fe3ca740a485
-  - b5d8e5475247
+  - cd2480f35935
+  - 4f2967b27e67
   - 44018dd6b447
-  - 3e1f6f6d557e
+  - fe3ca740a485
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: antismash
@@ -70,26 +70,26 @@ tools:
 - name: augustus
   owner: bgruening
   revisions:
+  - 09855551d713
   - 28433faa6e42
   - ca6d970d931c
-  - 09855551d713
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: bakta
   owner: iuc
   revisions:
   - 728dacaf08a9
-  - 92eee5f31117
-  - da5f1924bb2e
   - d77802fe76f7
+  - da5f1924bb2e
+  - 92eee5f31117
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: barrnap
   owner: iuc
   revisions:
-  - 7355bbf5e05f
-  - fe48aa4ccd5e
   - 8fd427007e93
+  - fe48aa4ccd5e
+  - 7355bbf5e05f
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: braker3
@@ -114,17 +114,17 @@ tools:
 - name: cpat
   owner: bgruening
   revisions:
-  - 7ccc6234b54e
-  - 1ac12c0cc7a0
   - 8e9e228c54c4
+  - 1ac12c0cc7a0
+  - 7ccc6234b54e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: eggnog_mapper
   owner: galaxyp
   revisions:
   - 9d1fbff733cf
-  - 63662ae295d6
   - d9c3016f7283
+  - 63662ae295d6
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: exonerate
@@ -148,61 +148,61 @@ tools:
 - name: funannotate_annotate
   owner: iuc
   revisions:
-  - b6b5cd37f2a2
   - 756376aeb1ae
   - 14f588312c56
-  - 9f2455341fac
-  - 9c15ca7e764e
+  - b6b5cd37f2a2
   - 3bbe70fef6df
   - 582fd74dc2a1
+  - 9c15ca7e764e
+  - 9f2455341fac
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_clean
   owner: iuc
   revisions:
-  - 73428a792541
-  - 989f7c061f35
+  - 0ffe5be70caf
   - a230ea445788
   - 1691af4a0d17
+  - 989f7c061f35
   - 30fb23d4c31c
-  - 0ffe5be70caf
   - 8e1ace8f77c6
+  - 73428a792541
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_compare
   owner: iuc
   revisions:
+  - 563a19373357
   - 0418d28136de
-  - 5a5ae61da69c
-  - 494f0bb4a993
+  - 57c6718cbfcc
   - e94187d661df
-  - 563a19373357
   - 30f08d74024f
-  - 57c6718cbfcc
+  - 5a5ae61da69c
+  - 494f0bb4a993
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_predict
   owner: iuc
   revisions:
-  - f77d7b685bb3
   - f31125bb85ea
+  - 2bba2ff070d9
+  - 1bc5a03faf2e
+  - f77d7b685bb3
   - d6c7106b7b2e
   - 7abc5f6dd595
-  - 1bc5a03faf2e
-  - 2bba2ff070d9
   - 4b96ced19f75
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_sort
   owner: iuc
   revisions:
-  - b3cf4684e9c7
-  - 54961e026fe4
   - fed64e676186
-  - 52af33194019
   - d77fdcca400e
-  - d3af38b9c7e1
   - 520e30695ec3
+  - 54961e026fe4
+  - b3cf4684e9c7
+  - 52af33194019
+  - d3af38b9c7e1
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: get_orfs_or_cdss
@@ -228,9 +228,9 @@ tools:
 - name: goseq
   owner: iuc
   revisions:
+  - 8b3e3657034e
   - 602de62d995b
   - 43798b4caee0
-  - 8b3e3657034e
   - ef2ad746b589
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -263,8 +263,8 @@ tools:
   owner: bgruening
   revisions:
   - 74810db257cc
-  - 98cafcbd2578
   - c55643c3d813
+  - 98cafcbd2578
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: jcvi_gff_stats
@@ -289,19 +289,19 @@ tools:
 - name: maker
   owner: iuc
   revisions:
-  - 370c210d9541
-  - d46d803ca6cc
   - 3c1a01127868
+  - d46d803ca6cc
+  - 370c210d9541
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: mitos2
   owner: iuc
   revisions:
-  - 033755194fe9
-  - 624606f7c996
-  - b815ec682418
   - c8ac28e8ac44
   - e95d52d295d7
+  - 624606f7c996
+  - b815ec682418
+  - 033755194fe9
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: mob_suite
@@ -344,10 +344,10 @@ tools:
   owner: crs4
   revisions:
   - bf68eb663bc3
+  - d643e3b03500
+  - eaee459f3d69
   - 8a22554cdde2
   - a17498c603ec
-  - eaee459f3d69
-  - d643e3b03500
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: red
@@ -391,22 +391,22 @@ tools:
 - name: snpeff
   owner: iuc
   revisions:
-  - 68693743661e
   - 5c7b70713fb5
-  - 8f92c2b26e6d
-  - cfcf33df7fc0
   - 5b80f544c67f
-  - 268d162b9c49
   - 9473cd297a76
+  - cfcf33df7fc0
   - 5a29ab10dba6
+  - 68693743661e
+  - 8f92c2b26e6d
+  - 268d162b9c49
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snpsift
   owner: iuc
   revisions:
+  - 5fab4f81391d
   - 2b3e65a4252f
   - 09d6806c609e
-  - 5fab4f81391d
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snptools
@@ -432,15 +432,15 @@ tools:
   owner: iuc
   revisions:
   - 37213cf56392
-  - 51dd22484644
+  - d03af1c7002c
   - e1a9d6fd258d
-  - ac8250086ac3
-  - 200c378d85f3
   - 809dfc93d593
+  - 45083d070fb8
+  - 200c378d85f3
   - ba6f87115e13
+  - ac8250086ac3
+  - 51dd22484644
   - 037a11682176
-  - d03af1c7002c
-  - 45083d070fb8
   - 4839e590cb26
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu