Jenkins install build 1345.

usegalaxy-au · Oct 31, 2023 · cad9a28 · cad9a28
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commit cad9a28
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diff --git a/automated_tool_installation_log.tsv b/automated_tool_installation_log.tsv
@@ -5808,3 +5808,4 @@ Update	169	18/10/23 22:39:31	shovill	False	Installed	iuc	ee17a294d3a3	ee17a294d3
 Install	1340	20/10/23 09:30:06	kraken_biom	True	Installed	iuc	65eb9962d272	65eb9962d272		5/5	5/5	Metagenomic Analysis	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1340/install_log.txt
 Install	1340	20/10/23 09:55:14	krakentools_extract_kraken_reads	True	Installed	iuc	f329328da134	f329328da134		11/11	11/11	Metagenomic Analysis	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1340/install_log.txt
 Install	1343	31/10/23 10:27:46	rgi	True	Tests failed	card	84bd24ac33fd	84bd24ac33fd	Production Testing		0/1	Annotation	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1343/install_log.txt
+Install	1345	31/10/23 16:02:28	ena_upload	False	Tests failed	iuc	480d9e9d156b	480d9e9d156b	Staging Testing	5/9		Send Data	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1345/install_log.txt
diff --git a/requests/ena_new.yml b/requests/ena_new.yml
diff --git a/staging.gvl.org.au/annotation.yml b/staging.gvl.org.au/annotation.yml
@@ -2,11 +2,11 @@ tools:
 - name: abricate
   owner: iuc
   revisions:
-  - 4efdca267d51
-  - 78c75f134c16
-  - c2ef298da409
   - 3f3e247c053d
+  - 4efdca267d51
   - 6e9aea89e388
+  - c2ef298da409
+  - 78c75f134c16
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: aegean_canongff3
@@ -36,15 +36,15 @@ tools:
 - name: annotatemyids
   owner: iuc
   revisions:
-  - 1aae04680c4b
-  - 44018dd6b447
+  - 4f2967b27e67
   - f29602ae449e
+  - 44018dd6b447
   - 133f36c29579
-  - 4f2967b27e67
-  - b5d8e5475247
-  - 3e1f6f6d557e
   - fe3ca740a485
+  - 1aae04680c4b
   - cd2480f35935
+  - 3e1f6f6d557e
+  - b5d8e5475247
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: antismash
@@ -57,17 +57,17 @@ tools:
 - name: augustus_training
   owner: bgruening
   revisions:
-  - 7be22100e5e1
-  - 6519ebe25019
   - dc027fa56d55
+  - 6519ebe25019
+  - 7be22100e5e1
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: augustus
   owner: bgruening
   revisions:
+  - ca6d970d931c
   - 09855551d713
   - 28433faa6e42
-  - ca6d970d931c
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: bakta
@@ -80,8 +80,8 @@ tools:
   owner: iuc
   revisions:
   - 8fd427007e93
-  - fe48aa4ccd5e
   - 7355bbf5e05f
+  - fe48aa4ccd5e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: chipseeker
@@ -99,8 +99,8 @@ tools:
 - name: eggnog_mapper
   owner: galaxyp
   revisions:
-  - 63662ae295d6
   - 9d1fbff733cf
+  - 63662ae295d6
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: exonerate
@@ -118,41 +118,41 @@ tools:
 - name: funannotate_annotate
   owner: iuc
   revisions:
-  - 14f588312c56
   - 582fd74dc2a1
+  - 14f588312c56
   - 9f2455341fac
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_clean
   owner: iuc
   revisions:
-  - 73428a792541
   - a230ea445788
   - 30fb23d4c31c
+  - 73428a792541
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_compare
   owner: iuc
   revisions:
+  - 30f08d74024f
   - 563a19373357
   - 494f0bb4a993
-  - 30f08d74024f
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_predict
   owner: iuc
   revisions:
+  - 2bba2ff070d9
   - f31125bb85ea
   - 7abc5f6dd595
-  - 2bba2ff070d9
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_sort
   owner: iuc
   revisions:
   - b3cf4684e9c7
-  - d3af38b9c7e1
   - 52af33194019
+  - d3af38b9c7e1
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: get_orfs_or_cdss
@@ -164,9 +164,9 @@ tools:
 - name: gff_to_prot
   owner: iuc
   revisions:
+  - 2aea122fbd25
   - 07d7991bf205
   - 79261884facd
-  - 2aea122fbd25
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goenrichment
@@ -178,10 +178,10 @@ tools:
 - name: goseq
   owner: iuc
   revisions:
-  - ef2ad746b589
   - 8b3e3657034e
-  - 602de62d995b
   - 43798b4caee0
+  - ef2ad746b589
+  - 602de62d995b
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goslimmer
@@ -206,8 +206,8 @@ tools:
 - name: interproscan
   owner: bgruening
   revisions:
-  - 98cafcbd2578
   - c55643c3d813
+  - 98cafcbd2578
   - 74810db257cc
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -226,8 +226,8 @@ tools:
 - name: maker_map_ids
   owner: iuc
   revisions:
-  - 326f9c294b09
   - e906fa778440
+  - 326f9c294b09
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: maker
@@ -266,11 +266,11 @@ tools:
 - name: prokka
   owner: crs4
   revisions:
-  - 8a22554cdde2
-  - d643e3b03500
+  - eaee459f3d69
   - bf68eb663bc3
   - a17498c603ec
-  - eaee459f3d69
+  - d643e3b03500
+  - 8a22554cdde2
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: red
@@ -289,8 +289,8 @@ tools:
 - name: repeatmodeler
   owner: csbl
   revisions:
-  - 41bfbaf3c959
   - 8661b2607b7e
+  - 41bfbaf3c959
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snap_training
@@ -302,13 +302,13 @@ tools:
 - name: snpeff
   owner: iuc
   revisions:
-  - 8f92c2b26e6d
+  - 68693743661e
   - cfcf33df7fc0
+  - 8f92c2b26e6d
+  - 5c7b70713fb5
   - 5a29ab10dba6
-  - 68693743661e
   - 268d162b9c49
   - 5b80f544c67f
-  - 5c7b70713fb5
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snpsift
@@ -340,22 +340,22 @@ tools:
 - name: tbprofiler
   owner: iuc
   revisions:
-  - ac8250086ac3
   - 45083d070fb8
-  - 37213cf56392
-  - 200c378d85f3
-  - ba6f87115e13
   - e1a9d6fd258d
-  - 809dfc93d593
   - 037a11682176
+  - ac8250086ac3
+  - ba6f87115e13
   - 2c68b0c38785
+  - 809dfc93d593
+  - 37213cf56392
+  - 200c378d85f3
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: transit_gumbel
   owner: iuc
   revisions:
-  - f50807720df1
   - 8fc50fe60127
+  - f50807720df1
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: trna_prediction