Jenkins install build 1298.

usegalaxy-au · Jul 11, 2023 · ee52197 · ee52197
1 parent 860a1b4
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diff --git a/automated_tool_installation_log.tsv b/automated_tool_installation_log.tsv
@@ -5230,3 +5230,4 @@ Update	155	05/07/23 14:51:55	openms_decoydatabase	False	Tests failed	galaxyp	255
 Update	155	05/07/23 14:53:58	openms_targetedfileconverter	False	Tests failed	galaxyp	9c70a651a53e	9c70a651a53e	Staging Testing	0/20		Proteomics	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_155/install_log.txt
 Update	155	05/07/23 14:56:02	openms_xmlvalidator	False	Tests failed	galaxyp	f036e8cf1a55	f036e8cf1a55	Staging Testing	0/1		Proteomics	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_155/install_log.txt
 Update	155	05/07/23 15:06:53	salmon	False	Tests failed	bgruening	15cd64d7c58b	15cd64d7c58b	Staging Testing	10/11		RNA-seq	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/update_build_155/install_log.txt
+Install	1298	11/07/23 12:19:45	data_manager_build_bracken_database	True	Installed	iuc	5c8a23ccb14a	5c8a23ccb14a		0/0	0/0	None	toolshed.g2.bx.psu.edu	/var/lib/jenkins/galaxy_tool_automation/install_build_1298/install_log.txt
diff --git a/requests/bracken_dm.yml b/requests/bracken_dm.yml
diff --git a/staging.usegalaxy.org.au/annotation.yml b/staging.usegalaxy.org.au/annotation.yml
@@ -5,8 +5,8 @@ tools:
   - 78c75f134c16
   - 4efdca267d51
   - 6e9aea89e388
-  - c2ef298da409
   - 3f3e247c053d
+  - c2ef298da409
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: aegean_canongff3
@@ -36,13 +36,13 @@ tools:
 - name: annotatemyids
   owner: iuc
   revisions:
-  - 44018dd6b447
-  - f29602ae449e
   - fe3ca740a485
   - 1aae04680c4b
-  - 133f36c29579
-  - 4f2967b27e67
   - b5d8e5475247
+  - 4f2967b27e67
+  - f29602ae449e
+  - 133f36c29579
+  - 44018dd6b447
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: antismash
@@ -55,17 +55,17 @@ tools:
 - name: augustus_training
   owner: bgruening
   revisions:
+  - 7be22100e5e1
   - 6519ebe25019
   - dc027fa56d55
-  - 7be22100e5e1
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: augustus
   owner: bgruening
   revisions:
-  - 09855551d713
   - ca6d970d931c
   - 28433faa6e42
+  - 09855551d713
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: bakta
@@ -77,8 +77,8 @@ tools:
 - name: barrnap
   owner: iuc
   revisions:
-  - 8fd427007e93
   - 7355bbf5e05f
+  - 8fd427007e93
   - fe48aa4ccd5e
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
@@ -97,8 +97,8 @@ tools:
 - name: eggnog_mapper
   owner: galaxyp
   revisions:
-  - 63662ae295d6
   - 9d1fbff733cf
+  - 63662ae295d6
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: exonerate
@@ -124,25 +124,25 @@ tools:
 - name: funannotate_clean
   owner: iuc
   revisions:
-  - a230ea445788
   - 30fb23d4c31c
+  - a230ea445788
   - 73428a792541
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_compare
   owner: iuc
   revisions:
-  - 30f08d74024f
   - 494f0bb4a993
+  - 30f08d74024f
   - 563a19373357
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_predict
   owner: iuc
   revisions:
   - 7abc5f6dd595
-  - f31125bb85ea
   - 2bba2ff070d9
+  - f31125bb85ea
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: funannotate_sort
@@ -162,9 +162,9 @@ tools:
 - name: gff_to_prot
   owner: iuc
   revisions:
+  - 79261884facd
   - 2aea122fbd25
   - 07d7991bf205
-  - 79261884facd
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: goenrichment
@@ -197,16 +197,16 @@ tools:
 - name: infernal
   owner: bgruening
   revisions:
-  - 477d829d3250
   - c9e29ac5d099
+  - 477d829d3250
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: interproscan
   owner: bgruening
   revisions:
   - 74810db257cc
-  - 98cafcbd2578
   - c55643c3d813
+  - 98cafcbd2578
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: jcvi_gff_stats
@@ -224,16 +224,16 @@ tools:
 - name: maker_map_ids
   owner: iuc
   revisions:
-  - 326f9c294b09
   - e906fa778440
+  - 326f9c294b09
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: maker
   owner: iuc
   revisions:
-  - d46d803ca6cc
   - 370c210d9541
   - 3c1a01127868
+  - d46d803ca6cc
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: mitos2
@@ -264,11 +264,11 @@ tools:
 - name: prokka
   owner: crs4
   revisions:
-  - a17498c603ec
-  - bf68eb663bc3
   - d643e3b03500
-  - eaee459f3d69
   - 8a22554cdde2
+  - bf68eb663bc3
+  - a17498c603ec
+  - eaee459f3d69
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: red
@@ -308,19 +308,19 @@ tools:
   revisions:
   - 68693743661e
   - 5c7b70713fb5
-  - 5a29ab10dba6
   - 5b80f544c67f
-  - cfcf33df7fc0
   - 268d162b9c49
   - 8f92c2b26e6d
+  - cfcf33df7fc0
+  - 5a29ab10dba6
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snpsift
   owner: iuc
   revisions:
-  - 5fab4f81391d
   - 2b3e65a4252f
   - 09d6806c609e
+  - 5fab4f81391d
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: snptools
@@ -344,15 +344,15 @@ tools:
 - name: tbprofiler
   owner: iuc
   revisions:
-  - 45083d070fb8
-  - 200c378d85f3
-  - ac8250086ac3
+  - ba6f87115e13
   - e1a9d6fd258d
   - 037a11682176
-  - 2c68b0c38785
+  - 45083d070fb8
+  - ac8250086ac3
   - 37213cf56392
+  - 200c378d85f3
+  - 2c68b0c38785
   - 809dfc93d593
-  - ba6f87115e13
   tool_panel_section_label: Annotation
   tool_shed_url: toolshed.g2.bx.psu.edu
 - name: transit_gumbel