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Jenkins install build 1673 errors #1158

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merged 1 commit into from
Oct 15, 2024

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galaxy-au-tools-jenkins-bot
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Failed to install plot_ragtag_paf on https://staging.gvl.org.au
See log on Jenkins: /var/lib/jenkins-2024/galaxy_tool_automation/install_build_1673/staging/[email protected]

@cat-bro
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cat-bro commented Oct 15, 2024

Job in error state.. tool_id: toolshed.g2.bx.psu.edu/repos/galaxy-australia/plot_ragtag_paf/plot_ragtag_paf/0.0.2, exit_code: 4, stderr: sed: couldn't open temporary file /etc/R/sedaetMuZ: Permission denied

ping @TomHarrop

@TomHarrop
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Sorry @cat-bro this was poor use of brain on my part, I've pushed a new version that uses the user R profile and doesn't require --writable-tmpfs. Could we try again with version 0.0.3 on the toolshed?

@cat-bro cat-bro merged commit 6658b54 into master Oct 15, 2024
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3 participants