Update tools.yml #1325
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Update tools.yml #1325
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Increasing Optitype memory and cores so that it runs faster, as it is taking more than ten days to finish running
bgruening
reviewed
Sep 30, 2024
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seems like it. I can reduce the core to 12.
…On Mon, Sep 30, 2024 at 2:20 PM Björn Grüning ***@***.***> wrote:
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------------------------------
In files/galaxy/tpv/tools.yml
<#1325 (comment)>
:
> @@ -1494,3 +1494,9 @@ tools:
scheduling:
require:
- singularity
+
+ toolshed.g2.bx.psu.edu/repos/iuc/optitype/optitype/.*:
+ cores: 24
+ mem: 256
You really need that large amounts?
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Increasing Optitype memory and cores so that it runs faster, as it is taking more than ten days to finish running