Autoupdate tool blog post

_posts/2024-04-07-tool-update.md

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+---
+site: freiburg
+tags: [tools]
+title: UseGalaxy.eu Tool Updates for 2024-04-07
+supporters:
+- denbi
+- elixir
+---
+
+On 2024-04-07, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in [Jenkins Build #439](https://build.galaxyproject.eu/job/usegalaxy-eu/job/install-tools/#439/)
+
+
+## QIIME 2
+
+- qiime2__deblur__denoise_16S was updated to [2572fc0f88f2](https://toolshed.g2.bx.psu.edu/view/q2d2/qiime2__deblur__denoise_16S/2572fc0f88f2)
+- qiime2__deblur__denoise_16S was updated to [b883cbea5623](https://toolshed.g2.bx.psu.edu/view/q2d2/qiime2__deblur__denoise_16S/b883cbea5623)
+
+## Get Data
+
+- sra_tools was updated to [ba931a59dd59](https://toolshed.g2.bx.psu.edu/view/iuc/sra_tools/ba931a59dd59)
+
+## RNA Analysis
+
+- dexseq was updated to [9a7c5b6d8f1e](https://toolshed.g2.bx.psu.edu/view/iuc/dexseq/9a7c5b6d8f1e)
+
+## Assembly
+
+- hapog was updated to [5287036a797a](https://toolshed.g2.bx.psu.edu/view/iuc/hapog/5287036a797a)
+- pairtools_dedup was updated to [ae537f4d4b93](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_dedup/ae537f4d4b93)
+- pairtools_parse was updated to [a98caf2d8309](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_parse/a98caf2d8309)
+- pairtools_sort was updated to [d392cfd963f4](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_sort/d392cfd963f4)
+- pairtools_split was updated to [2c87e49a6407](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_split/2c87e49a6407)
+- pairtools_stats was updated to [3c87fa1a3b50](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_stats/3c87fa1a3b50)
+- trycycler_cluster was updated to [ed2425b9fd27](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_cluster/ed2425b9fd27)
+- trycycler_consensus was updated to [f31d376ce725](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_consensus/f31d376ce725)
+- trycycler_partition was updated to [af40e971a8cc](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_partition/af40e971a8cc)
+- trycycler_reconcile_msa was updated to [bb11fefb23a3](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_reconcile_msa/bb11fefb23a3)
+- trycycler_subsample was updated to [6bfab4a4a988](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_subsample/6bfab4a4a988)
+
+## Mapping
+
+- minimap2 was updated to [5cc34c3f440d](https://toolshed.g2.bx.psu.edu/view/iuc/minimap2/5cc34c3f440d)
+
+## Phylogenetics
+
+- hybpiper was updated to [48836bd31536](https://toolshed.g2.bx.psu.edu/view/iuc/hybpiper/48836bd31536)
+- hyphy_prime was updated to [4072360120e4](https://toolshed.g2.bx.psu.edu/view/iuc/hyphy_prime/4072360120e4)
+
+## Variant Calling
+
+- sansa_annotate was updated to [584c09b1967a](https://toolshed.g2.bx.psu.edu/view/iuc/sansa_annotate/584c09b1967a)
+
+## Virology
+
+- varvamp was updated to [80e18c0836e5](https://toolshed.g2.bx.psu.edu/view/iuc/varvamp/80e18c0836e5)
+
+## None
+
+- data_manager_diamond_database_builder was updated to [4a08b7b76b78](https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_diamond_database_builder/4a08b7b76b78)
+
+## Metabolomics
+
+- tracegroomer was updated to [3cb0128a59a6](https://toolshed.g2.bx.psu.edu/view/iuc/tracegroomer/3cb0128a59a6)
+