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--- | ||
site: freiburg | ||
tags: [tools] | ||
title: UseGalaxy.eu Tool Updates for 2023-06-27 | ||
supporters: | ||
- denbi | ||
- elixir | ||
--- | ||
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On 2023-06-27, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in [Jenkins Build #392](https://build.galaxyproject.eu/job/usegalaxy-eu/job/install-tools/#392/) | ||
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## QIIME 2 | ||
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- qiime2__deblur__denoise_16S was updated to [2572fc0f88f2](https://toolshed.g2.bx.psu.edu/view/q2d2/qiime2__deblur__denoise_16S/2572fc0f88f2) | ||
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## Get Data | ||
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- sra_tools was updated to [6ea73833cf67](https://toolshed.g2.bx.psu.edu/view/iuc/sra_tools/6ea73833cf67) | ||
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## Proteomics | ||
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- maxquant was updated to [8934bc76bb52](https://toolshed.g2.bx.psu.edu/view/galaxyp/maxquant/8934bc76bb52) | ||
- openms_openpepxl was updated to [a2a842b00f9c](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_openpepxl/a2a842b00f9c) | ||
- openms_percolatoradapter was updated to [0fc9ae55bcfc](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_percolatoradapter/0fc9ae55bcfc) | ||
- openms_percolatoradapter was updated to [e7881a82b56d](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_percolatoradapter/e7881a82b56d) | ||
- openms_xfdr was updated to [81402a5e4173](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_xfdr/81402a5e4173) | ||
- openms_xfdr was updated to [9a6e3bb0f358](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_xfdr/9a6e3bb0f358) | ||
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## Machine Learning | ||
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- keras_batch_models was updated to [62b85c8ad8fa](https://toolshed.g2.bx.psu.edu/view/bgruening/keras_batch_models/62b85c8ad8fa) | ||
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## Metagenomic Analysis | ||
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- krakentools_alpha_diversity was updated to [bab112ba9d62](https://toolshed.g2.bx.psu.edu/view/iuc/krakentools_alpha_diversity/bab112ba9d62) | ||
- krakentools_beta_diversity was updated to [c254d75b8b67](https://toolshed.g2.bx.psu.edu/view/iuc/krakentools_beta_diversity/c254d75b8b67) | ||
- krakentools_combine_kreports was updated to [073c867c5244](https://toolshed.g2.bx.psu.edu/view/iuc/krakentools_combine_kreports/073c867c5244) | ||
- krakentools_extract_kraken_reads was updated to [f329328da134](https://toolshed.g2.bx.psu.edu/view/iuc/krakentools_extract_kraken_reads/f329328da134) | ||
- krakentools_kreport2krona was updated to [2deaada69b14](https://toolshed.g2.bx.psu.edu/view/iuc/krakentools_kreport2krona/2deaada69b14) | ||
- krakentools_kreport2mpa was updated to [bb96a1e6583d](https://toolshed.g2.bx.psu.edu/view/iuc/krakentools_kreport2mpa/bb96a1e6583d) | ||
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## None | ||
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- data_manager_bakta was updated to [3e73c97f025d](https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_bakta/3e73c97f025d) | ||
- data_manager_diamond_database_builder was updated to [4a08b7b76b78](https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_diamond_database_builder/4a08b7b76b78) | ||
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## RNA Analysis | ||
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- salmon was updated to [15cd64d7c58b](https://toolshed.g2.bx.psu.edu/view/bgruening/salmon/15cd64d7c58b) | ||
- salmonquantmerge was updated to [dba18bf7528f](https://toolshed.g2.bx.psu.edu/view/bgruening/salmonquantmerge/dba18bf7528f) | ||
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## Single-cell | ||
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- alevin was updated to [e32b215b7c04](https://toolshed.g2.bx.psu.edu/view/bgruening/alevin/e32b215b7c04) | ||
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## Variant Calling | ||
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- artic_guppyplex was updated to [00e20a06ff1e](https://toolshed.g2.bx.psu.edu/view/iuc/artic_guppyplex/00e20a06ff1e) | ||
- artic_minion was updated to [468b90c41cde](https://toolshed.g2.bx.psu.edu/view/iuc/artic_minion/468b90c41cde) | ||
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