Autoupdate tool blog post

_posts/2023-09-25-tool-update.md

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+---
+site: freiburg
+tags: [tools]
+title: UseGalaxy.eu Tool Updates for 2023-09-25
+supporters:
+- denbi
+- elixir
+---
+
+On 2023-09-25, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in [Jenkins Build #405](https://build.galaxyproject.eu/job/usegalaxy-eu/job/install-tools/#405/)
+
+
+## GIS Data Handling
+
+- xarray_netcdf2netcdf was updated to [b0780241f916](https://toolshed.g2.bx.psu.edu/view/ecology/xarray_netcdf2netcdf/b0780241f916)
+
+## QIIME 2
+
+- qiime2__deblur__denoise_16S was updated to [2572fc0f88f2](https://toolshed.g2.bx.psu.edu/view/q2d2/qiime2__deblur__denoise_16S/2572fc0f88f2)
+
+## ChemicalToolBox
+
+- openbabel_structure_distance_finder was updated to [c066b5accacf](https://toolshed.g2.bx.psu.edu/view/bgruening/openbabel_structure_distance_finder/c066b5accacf)
+- sucos_clustering was updated to [12725d4b90f3](https://toolshed.g2.bx.psu.edu/view/bgruening/sucos_clustering/12725d4b90f3)
+
+## Proteomics
+
+- openms_falsediscoveryrate was updated to [100359fb8e7c](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_falsediscoveryrate/100359fb8e7c)
+- openms_openpepxl was updated to [40cc19c0dbd6](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_openpepxl/40cc19c0dbd6)
+- openms_openpepxl was updated to [a2a842b00f9c](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_openpepxl/a2a842b00f9c)
+- openms_openpepxl was updated to [fc36cfd19834](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_openpepxl/fc36cfd19834)
+- openms_percolatoradapter was updated to [0fc9ae55bcfc](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_percolatoradapter/0fc9ae55bcfc)
+- openms_percolatoradapter was updated to [e7881a82b56d](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_percolatoradapter/e7881a82b56d)
+- openms_xfdr was updated to [81402a5e4173](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_xfdr/81402a5e4173)
+- openms_xfdr was updated to [9a6e3bb0f358](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_xfdr/9a6e3bb0f358)
+
+## Machine Learning
+
+- keras_model_builder was updated to [e3b420d0b71a](https://toolshed.g2.bx.psu.edu/view/bgruening/keras_model_builder/e3b420d0b71a)
+- sklearn_pairwise_metrics was updated to [2a1afd3481ce](https://toolshed.g2.bx.psu.edu/view/bgruening/sklearn_pairwise_metrics/2a1afd3481ce)
+
+## Gemini
+
+- gemini_actionable_mutations was updated to [a0379503290f](https://toolshed.g2.bx.psu.edu/view/iuc/gemini_actionable_mutations/a0379503290f)
+- gemini_actionable_mutations was updated to [f62ed0e84665](https://toolshed.g2.bx.psu.edu/view/iuc/gemini_actionable_mutations/f62ed0e84665)
+- gemini_amend was updated to [4e0b84607b3d](https://toolshed.g2.bx.psu.edu/view/iuc/gemini_amend/4e0b84607b3d)
+- gemini_amend was updated to [b8b120a4cef7](https://toolshed.g2.bx.psu.edu/view/iuc/gemini_amend/b8b120a4cef7)
+- gemini_amend was updated to [bff8fad3fb69](https://toolshed.g2.bx.psu.edu/view/iuc/gemini_amend/bff8fad3fb69)
+- gemini_annotate was updated to [567837ca5f33](https://toolshed.g2.bx.psu.edu/view/iuc/gemini_annotate/567837ca5f33)
+- gemini_annotate was updated to [8da05bf2b1d1](https://toolshed.g2.bx.psu.edu/view/iuc/gemini_annotate/8da05bf2b1d1)
+
+## Graph/Display Data
+
+- ggplot2_violin was updated to [a597d59df9ee](https://toolshed.g2.bx.psu.edu/view/iuc/ggplot2_violin/a597d59df9ee)
+
+## RNA Analysis
+
+- trinity_abundance_estimates_to_matrix was updated to [a009c96c5c18](https://toolshed.g2.bx.psu.edu/view/iuc/trinity_abundance_estimates_to_matrix/a009c96c5c18)
+- trinity_align_and_estimate_abundance was updated to [75f4e1859ed7](https://toolshed.g2.bx.psu.edu/view/iuc/trinity_align_and_estimate_abundance/75f4e1859ed7)
+
+## None
+
+- data_manager_diamond_database_builder was updated to [4a08b7b76b78](https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_diamond_database_builder/4a08b7b76b78)
+