Merge pull request #1149 from Marie59/index_update

Improvement of earth-system index

index-earth-system.md

@@ -2,12 +2,13 @@
 layout: subsite-galaxy
 ---
 
-![Fair-Ease on Galaxy](/assets/media/logo_fair_ease.png){:.sc-intro-left}
+![Fair-Ease on Galaxy](assets/media/fair_ease_colour.png){:.sc-intro-left}
 
-# Welcome to Galaxy for Fair-Ease
+# Welcome to Galaxy for Earth System and environment
+<img src="assets/media/fair_ease_background.png" alt="Fair-Ease project"/>
 {:.no_toc}
 <br>
-**Galaxy for Fair-Ease** ([Fair-Ease](https://fairease.eu/){:target="_blank"}) is a virtual platform to process, analyse and visualize Earth System, Environment and Biodiversity data. It is based on the [Galaxy framework](https://galaxyproject.org){:target="_blank"}, which guarantees simple access, easy extension, flexible adaption to personal and security needs, and sophisticated analyses independent of command-line knowledge.
+Galaxy for Earth System and environment was implemented within the project [**Fair-Ease**](https://fairease.eu/){:target="_blank"}. It's a virtual platform to process, analyse and visualize Earth System, Environment and Biodiversity data. It is based on the [Galaxy framework](https://galaxyproject.org){:target="_blank"}, which guarantees simple access, easy extension, flexible adaption to personal and security needs, and sophisticated analyses independent of command-line knowledge.
 
 <br>
 # Content
@@ -21,6 +22,23 @@ layout: subsite-galaxy
 
 Are you new to Galaxy, or returning after a long time, and looking for help to get started? Take a [__guided tour__]({{ page.website }}/tours/core.galaxy_ui){:target="_blank"} through Galaxy's user interface.
 
+# Tools
+
+Multiple tools on Earth System, Environment and Biodiversity data analysis will be available in this custom Galaxy instance:
+
+- **General tools**
+    - [QGIS](https://earth-system.usegalaxy.eu/root?tool_id=interactive_tool_qgis)
+    - [HDFviewer](https://earth-system.usegalaxy.eu/root?tool_id=interactive_tool_hdfviewer)
+- **Coastal Water Dynamics tools**
+    - Ocean Data viewer [ODV](https://earth-system.usegalaxy.eu/root?tool_id=interactive_tool_odv)
+    - [DIVAnd](https://earth-system.usegalaxy.eu/root?tool_id=interactive_tool_divand)
+    - [Source](https://earth-system.usegalaxy.eu/root?tool_id=interactive_tool_source)
+- **Bio-GeoChemical tools**
+    - [Scoop Argo](https://earth-system.usegalaxy.eu/root?tool_id=interactive_tool_scoop3_argo)
+- **Marine omics tools**
+- **Earth critical zone tools** on land degradation
+- **Volcano tools**
+
 
 # Training
 
@@ -49,24 +67,15 @@ All relevant materials for Earth System, Environment and Biodiversity data analy
 
 Lesson | Slides | Hands-on | Input dataset | Workflows | Galaxy History
 --- | --- | --- | --- | --- | ---
-Welcome and introduction to Galaxy | [<i class="fa fa-slideshare" aria-hidden="true"></i>](https://training.galaxyproject.org/topics/introduction/tutorials/galaxy-intro-short/slides.html){:target="_blank"} / [<i class="fa fa-video-camera" aria-hidden="true"></i>](https://training.galaxyproject.org/videos/watch.html?v=introduction/tutorials/galaxy-intro-short/slides){:target="_blank"} | [<i class="fa fa-laptop" aria-hidden="true"></i>](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/galaxy-intro-short/tutorial.html){:target="_blank"} | [<i class="fa fa-files-o" aria-hidden="true"></i>](https://doi.org/10.5281/zenodo.582600){:target="_blank"} | [<i class="fa fa-share-alt" aria-hidden="true"></i>](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/galaxy-intro-short/workflows/){:target="_blank"} |
+Welcome and introduction to Galaxy | [<i class="fa fa-slideshare" aria-hidden="true"></i>](https://training.galaxyproject.org/topics/introduction/tutorials/galaxy-intro-short/slides.html){:target="_blank"}
 
-# Tools
+[<i class="fa fa-video-camera" aria-hidden="true"></i>](https://training.galaxyproject.org/videos/watch.html?v=introduction/tutorials/galaxy-intro-short/slides){:target="_blank"}
 
-Multiple tools on Earth System, Environment and Biodiversity data analysis will be available in this custom Galaxy instance:
+[<i class="fa fa-laptop" aria-hidden="true"></i>](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/galaxy-intro-short/tutorial.html){:target="_blank"}
 
-- **General tools**
-    - QGIS
-    - HDFviewer
-- **Coastal Water Dynamics tools**
-    - Data viewer : ODV
-    - DIVAnd
-    - Source
-- **Bio-GeoChemical tools**
-    - Scoop Argo
-- **Marine omics tools**
-- **Earth critical zone tools** on land degradation
-- **Volcano tools**
+[<i class="fa fa-files-o" aria-hidden="true"></i>](https://doi.org/10.5281/zenodo.582600){:target="_blank"}
+
+[<i class="fa fa-share-alt" aria-hidden="true"></i>](https://training.galaxyproject.org/training-material/topics/introduction/tutorials/galaxy-intro-short/workflows/){:target="_blank"}
 
 # Workflows
 
@@ -76,3 +85,5 @@ To orchestrate tools and help users with their analyses, several [workflows](htt
 # References
 
 {% bibliography --cited --prefix index-fair-ease --group_by none %}
+
+![European Comission](assets/media/en_funded_eu.jpg){:.sc-intro-left}