-
Notifications
You must be signed in to change notification settings - Fork 114
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
UseGalaxy.EU Jenkins Bot
committed
Jul 9, 2023
1 parent
141f8a6
commit e901e09
Showing
1 changed file
with
84 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,84 @@ | ||
| --- | ||
| site: freiburg | ||
| tags: [tools] | ||
| title: UseGalaxy.eu Tool Updates for 2023-07-09 | ||
| supporters: | ||
| - denbi | ||
| - elixir | ||
| --- | ||
|
|
||
| On 2023-07-09, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in [Jenkins Build #394](https://build.galaxyproject.eu/job/usegalaxy-eu/job/install-tools/#394/) | ||
|
|
||
|
|
||
| ## Metabolomics | ||
|
|
||
| - biotransformer was updated to [90dc951da294](https://toolshed.g2.bx.psu.edu/view/recetox/biotransformer/90dc951da294) | ||
| - msmetaenhancer was updated to [90745ecc5e9f](https://toolshed.g2.bx.psu.edu/view/recetox/msmetaenhancer/90745ecc5e9f) | ||
| - recetox_aplcms_align_features was updated to [2d13fcae8b84](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_align_features/2d13fcae8b84) | ||
| - recetox_aplcms_compute_clusters was updated to [60a09c4fa7a0](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_compute_clusters/60a09c4fa7a0) | ||
| - recetox_aplcms_compute_template was updated to [51e37adf988f](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_compute_template/51e37adf988f) | ||
| - recetox_aplcms_correct_time was updated to [474d2bcb22e4](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_correct_time/474d2bcb22e4) | ||
| - recetox_aplcms_generate_feature_table was updated to [702a849c1e0e](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_generate_feature_table/702a849c1e0e) | ||
| - recetox_aplcms_merge_known_table was updated to [396a3b1eafd0](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_merge_known_table/396a3b1eafd0) | ||
| - recetox_aplcms_recover_weaker_signals was updated to [c3d4b82c7e5d](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_recover_weaker_signals/c3d4b82c7e5d) | ||
| - recetox_aplcms_remove_noise was updated to [156293ea9f88](https://toolshed.g2.bx.psu.edu/view/recetox/recetox_aplcms_remove_noise/156293ea9f88) | ||
| - riassigner was updated to [4e47a0fa9287](https://toolshed.g2.bx.psu.edu/view/recetox/riassigner/4e47a0fa9287) | ||
|
|
||
| ## QIIME 2 | ||
|
|
||
| - qiime2__deblur__denoise_16S was updated to [2572fc0f88f2](https://toolshed.g2.bx.psu.edu/view/q2d2/qiime2__deblur__denoise_16S/2572fc0f88f2) | ||
|
|
||
| ## Get Data | ||
|
|
||
| - uniprotxml_downloader was updated to [a371252a2cf6](https://toolshed.g2.bx.psu.edu/view/galaxyp/uniprotxml_downloader/a371252a2cf6) | ||
|
|
||
| ## Proteomics | ||
|
|
||
| - openms_openpepxl was updated to [a2a842b00f9c](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_openpepxl/a2a842b00f9c) | ||
| - openms_percolatoradapter was updated to [0fc9ae55bcfc](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_percolatoradapter/0fc9ae55bcfc) | ||
| - openms_percolatoradapter was updated to [e7881a82b56d](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_percolatoradapter/e7881a82b56d) | ||
| - openms_xfdr was updated to [81402a5e4173](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_xfdr/81402a5e4173) | ||
| - openms_xfdr was updated to [9a6e3bb0f358](https://toolshed.g2.bx.psu.edu/view/galaxyp/openms_xfdr/9a6e3bb0f358) | ||
|
|
||
| ## Assembly | ||
|
|
||
| - cactus_cactus was updated to [9eeb13a92d79](https://toolshed.g2.bx.psu.edu/view/galaxy-australia/cactus_cactus/9eeb13a92d79) | ||
| - cactus_export was updated to [d7ce0ec78e51](https://toolshed.g2.bx.psu.edu/view/galaxy-australia/cactus_export/d7ce0ec78e51) | ||
|
|
||
| ## Imaging | ||
|
|
||
| - count_objects was updated to [5bf8eb50b280](https://toolshed.g2.bx.psu.edu/view/imgteam/count_objects/5bf8eb50b280) | ||
| - superdsm was updated to [700ae37e5c69](https://toolshed.g2.bx.psu.edu/view/imgteam/superdsm/700ae37e5c69) | ||
|
|
||
| ## Mapping | ||
|
|
||
| - lastz was updated to [37b497aa133f](https://toolshed.g2.bx.psu.edu/view/devteam/lastz/37b497aa133f) | ||
|
|
||
| ## Metagenomic Analysis | ||
|
|
||
| - das_tool was updated to [e23e7bf8491b](https://toolshed.g2.bx.psu.edu/view/iuc/das_tool/e23e7bf8491b) | ||
|
|
||
| ## Mothur | ||
|
|
||
| - mothur_remove_otus was updated to [38c03ac3d622](https://toolshed.g2.bx.psu.edu/view/iuc/mothur_remove_otus/38c03ac3d622) | ||
|
|
||
| ## RNA Analysis | ||
|
|
||
| - seurat was updated to [fab6ff46e019](https://toolshed.g2.bx.psu.edu/view/iuc/seurat/fab6ff46e019) | ||
|
|
||
| ## Virology | ||
|
|
||
| - freyja_aggregate_plot was updated to [1f89eeba299a](https://toolshed.g2.bx.psu.edu/view/iuc/freyja_aggregate_plot/1f89eeba299a) | ||
| - freyja_boot was updated to [a09398bc953a](https://toolshed.g2.bx.psu.edu/view/iuc/freyja_boot/a09398bc953a) | ||
| - freyja_demix was updated to [c0a0e79d7196](https://toolshed.g2.bx.psu.edu/view/iuc/freyja_demix/c0a0e79d7196) | ||
| - freyja_variants was updated to [1f467ed22412](https://toolshed.g2.bx.psu.edu/view/iuc/freyja_variants/1f467ed22412) | ||
|
|
||
| ## None | ||
|
|
||
| - data_manager_diamond_database_builder was updated to [4a08b7b76b78](https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_diamond_database_builder/4a08b7b76b78) | ||
|
|
||
| ## Epigenetics | ||
|
|
||
| - hicup2juicer was updated to [f8cb84c49623](https://toolshed.g2.bx.psu.edu/view/bgruening/hicup2juicer/f8cb84c49623) | ||
| - hicup_hicup was updated to [852e1fac4802](https://toolshed.g2.bx.psu.edu/view/bgruening/hicup_hicup/852e1fac4802) | ||
|
|