Add llm others #103
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: AtomGPT github action | |
| on: [push, pull_request] | |
| jobs: | |
| miniconda: | |
| name: Miniconda ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: test | |
| environment-file: environment.yml | |
| python-version: "3.9" | |
| auto-activate-base: false | |
| - shell: bash -l {0} | |
| run: | | |
| conda info | |
| conda list | |
| - name: Lint | |
| shell: bash -l {0} | |
| run: | | |
| conda install flake8 pycodestyle pydocstyle | |
| #flake8 --ignore E203,W503 --exclude=examples,tests,scripts --statistics --count --exit-zero intermat/calculators.py intermat/generate.py | |
| #pycodestyle --ignore E203,W503 --exclude=examples,tests,scripts intermat | |
| #pydocstyle --match-dir=core --match-dir=io --match-dir=io --match-dir=ai --match-dir=analysis --match-dir=db --match-dir=tasks --count intermat | |
| - name: Run pytest | |
| shell: bash -l {0} | |
| run: | | |
| #source ~/.bashrc | |
| find . -type f > before_test_files.txt | |
| conda env create -f environment.yml | |
| conda activate atomgpt | |
| pip install triton | |
| #conda install alignn dgl=2.1.0 pytorch torchvision torchaudio pytorch-cuda transformers peft trl triton -c pytorch -c nvidia -y | |
| conda install pytest coverage codecov -y | |
| #conda install pytest coverage codecov pandas numpy matplotlib phonopy scikit-learn jarvis-tools --quiet | |
| #export DGLBACKEND=pytorch | |
| #export CUDA_VISIBLE_DEVICES="-1" | |
| #pip install phonopy flake8 pytest pycodestyle pydocstyle codecov pytest-cov coverage | |
| python setup.py develop | |
| echo 'environment.yml' | |
| conda env export | |
| echo 'forward model' | |
| echo 'ls' | |
| ls | |
| echo 'ls atomgpt' | |
| ls atomgpt | |
| echo 'atomgpt/examples/' | |
| ls atomgpt/examples/ | |
| echo 'atomgpt/examples/forward_model/' | |
| ls atomgpt/examples/forward_model/ | |
| python atomgpt/forward_models/forward_models.py --config_name atomgpt/examples/forward_model/config.json | |
| echo 'inverse model' | |
| #python atomgpt/examples/inverse_model/run.py | |
| coverage run -m pytest | |
| coverage report -m -i | |
| codecov --token="b493c988-5235-4f38-b60a-a2b670435968" | |
| #codecov --token="85bd9c5d-9e55-4f6d-bd69-350ee5e3bb41" | |
| find . -type f > after_test_files.txt | |