FAIR upload #187
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| --- | |
| name: PFHub Upload | |
| on: | |
| issues: | |
| types: [labeled, edited] | |
| jobs: | |
| pfhub-upload: | |
| # Only run workflow if this is an upload issue | |
| if: ${{ contains(github.event.issue.labels.*.name, 'upload') }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| # Parse the submitted issue | |
| - uses: stefanbuck/github-issue-parser@v2 | |
| id: issue-parser | |
| with: | |
| template-path: .github/ISSUE_TEMPLATE/upload.yml | |
| # Write the issue output to a JSON for later use (could have the | |
| # next two steps together | |
| - run: echo '${{ steps.issue-parser.outputs.jsonString }}' > upload.json | |
| # Write the contents of the issue to the environment (it's a | |
| # flat JSON file). It can't have multi-line values so summary is | |
| # done separately | |
| - id: jq | |
| run: jq -r 'to_entries|map("\(.key)=\(.value|tostring)")|.[]' upload.json >> $GITHUB_ENV | |
| # Set useful variable used more that once | |
| - run: echo "AUTHOR=${{ github.event.issue.user.login }}" >> $GITHUB_ENV | |
| # Set the short name of the upload | |
| - name: Set the short name of the upload | |
| id: set_short_name | |
| run: | | |
| export tmp=${{ env.doi }} | |
| export short_name=$( echo ${tmp##*/} ) | |
| echo "short_name=${short_name}" >> $GITHUB_ENV | |
| # Query the user | |
| - run: curl https://api.github.com/users/${{ env.AUTHOR }} > author.json | |
| # Don't need the JSON file and will be submitted in the PR if | |
| # kept | |
| - run: rm upload.json | |
| # Update the simulation list with the new simulation. Path is | |
| # slightly altered as the python-pfhub is assuming a new | |
| # location. | |
| - run: yq -i '. += "${{ env.doi }}"' _data/simulation_list.yaml | |
| # Create the pull request with a link to the issue that started | |
| # the action. PFHub user generates the PR. The user who | |
| # generated the issue does the commit. | |
| - name: Create Pull Request | |
| uses: peter-evans/create-pull-request@v4 | |
| id: create-pr | |
| with: | |
| commit-message: "upload: ${{ env.short_name }}" | |
| title: "upload: ${{ env.short_name }}" | |
| body: "adding upload from issue #${{ github.event.issue.number }}" | |
| branch: upload_${{ env.SIMNAME }}_${{ github.event.issue.number }} | |
| token: ${{ secrets.PFHUB_UPLOAD_USER }} | |
| delete-branch: true | |
| author: ${{ env.AUTHOR }} <${{ env.AUTHOR }}@users.noreply.github.com> | |
| # Comment back to the issue with link to the PR. | |
| - name: Create Comment | |
| uses: peter-evans/create-or-update-comment@v2 | |
| if: ${{ steps.create-pr.outputs.pull-request-number }} | |
| with: | |
| issue-number: ${{ github.event.issue.number }} | |
| token: ${{ secrets.PFHUB_UPLOAD_USER }} | |
| body: >- | |
| Thanks for the upload! Your submission has opened | |
| pull-request #${{ steps.create-pr.outputs.pull-request-number }}. | |
| Please follow up there. Wait for the build processes to | |
| complete and then follow the posted comments. |