ci: Add R ci test

uw-ssec · Jan 2, 2025 · a8cdfcd · a8cdfcd
1 parent ad74fc5
commit a8cdfcd
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diff --git a/.github/workflows/ci-R.yml b/.github/workflows/ci-R.yml
@@ -0,0 +1,26 @@
+name: CI R
+
+on:
+  push:
+    branches:
+      - main
+      - dev
+  pull_request:
+
+permissions:
+  contents: read
+
+env:
+  PIXI_COLOR: always
+  R_ENV: r-phylo2vec
+
+jobs:
+  build_and_test:
+    name: R project
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: prefix-dev/[email protected]
+        with:
+          environments: ${{ env.R_ENV }}
+      - run: pixi run -e ${{ env.R_ENV }} test
diff --git a/pixi.toml b/pixi.toml
@@ -110,3 +110,6 @@ r-devtools = ">=2.4.5,<3"
 
 [feature.r.tasks.install-r]
 cmd = "Rscript ./r-phylo2vec/scripts/install-package.R"
+
+[feature.r.tasks.test]
+cmd = "Rscript ./r-phylo2vec/scripts/run-tests.R"
diff --git a/r-phylo2vec/scripts/run-tests.R b/r-phylo2vec/scripts/run-tests.R
@@ -0,0 +1,3 @@
+pkg_path <- "./r-phylo2vec"
+
+devtools::test(pkg_path, stop_on_failure = TRUE)
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1,3 @@
		pkg_path <- "./r-phylo2vec"

		devtools::test(pkg_path, stop_on_failure = TRUE)