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v2.4.1
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@mirimia mirimia released this 16 Apr 13:37
· 148 commits to master since this release
v2.4.1
7b1622c

VASTDB version control and minor updates

NEW

  • align and combine now print the VASTDB version that is used in the LOG file. The VASTDB file for each species now includes a file called VASTDB_VERSION which contains the version of the library (e.g. "vastdb.hs2.20.12.19"). If you had already downloaded version of VASTDB, you can simply add a file called VASTDB_VERSION into the VASTDB/Sp/ folder and add the version name on it.

  • The help messages of align and combine now print the available species for vast-tools in the local VASTDB installation.

Updates and fixes

  • For ALTA events, the alternative splice acceptors separated by "+" in the full coordinate (FullCO, 5th column in the INCLUSION table) are now sorted differently to make them consistent with the sorting of ALTD events. In both cases, the coordinates are now sorted from internal to external.
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