bug fix - problem with printing which indicator has all missing values

verbal-autopsy-software · May 7, 2024 · a814b3c · a814b3c
1 parent a379855
commit a814b3c
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Showing 2 changed files with 8 additions and 3 deletions.
diff --git a/pyproject.toml b/pyproject.toml
@@ -13,7 +13,7 @@ build-requires = [
 
 [project]
 name = "insilicova"
-version = "0.1.1"
+version = "0.1.2"
 authors = [
     {name = "Jason Thomas", email = "[email protected]"},
     {name = "Sherry Zhao", email =" [email protected]"},

diff --git a/src/insilicova/api.py b/src/insilicova/api.py
@@ -914,9 +914,14 @@ def _check_missing_all(self):
                 self._missing_all.append(i)
         if len(self._missing_all) > 0:
             missing_all_plus1 = np.array(self._missing_all) + 1
+            pb_no_ext = np.delete(self._probbase,
+                                  self._external_symps,
+                                  axis=0)
             missing_all_names = ", ".join(
-                self._probbase[missing_all_plus1,
-                               int(self.data_type == "WHO2012")])
+                # self._probbase[missing_all_plus1,
+                #                int(self.data_type == "WHO2012")])
+                pb_no_ext[missing_all_plus1,
+                          int(self.data_type == "WHO2012")])
             warnings.warn(f"{len(self._missing_all)} symptoms missing "
                           "completely and added to missing list. \n List of "
                           f"missing symptoms: {missing_all_names}\n",