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Fix CHM13 HiFi reads that minimap2 gets right and Giraffe gets wrong #47

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adamnovak opened this issue Jul 8, 2024 · 0 comments

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adamnovak commented Jul 8, 2024

In https://ucsc-gi.slack.com/archives/CJ2EHEH1A/p1720038830195099?thread_ts=1719905671.084099&cid=CJ2EHEH1A it is suggested that some reads Giraffe gets wrong might be better-scoring distraction mappings. We should figure out if that is the case.

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