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  1. vg vg Public

    tools for working with genome variation graphs

    C++ 1.1k 195

  2. libbdsg libbdsg Public

    Optimized sequence graph implementations for graph genomics

    C++ 34 6

  3. libhandlegraph libhandlegraph Public

    Library for the Handle Graph abstraction

    C++ 23 5

  4. toil-vg toil-vg Public

    Distributed and cloud computing framework for vg

    Python 21 14

Repositories

Showing 10 of 54 repositories
  • long-read-giraffe-experiments Public

    Experimental materials for testing the long-read mapping abilities of vg giraffe

    vgteam/long-read-giraffe-experiments’s past year of commit activity
    Python 4 0 20 0 Updated Dec 11, 2024
  • libbdsg Public

    Optimized sequence graph implementations for graph genomics

    vgteam/libbdsg’s past year of commit activity
    C++ 34 MIT 6 24 8 Updated Dec 11, 2024
  • vg Public

    tools for working with genome variation graphs

    vgteam/vg’s past year of commit activity
    C++ 1,132 195 834 (9 issues need help) 9 Updated Dec 9, 2024
  • libvgio Public

    A dynamic library that provides io for the vg toolkit.

    vgteam/libvgio’s past year of commit activity
    C++ 8 7 6 0 Updated Nov 22, 2024
  • libbdsg-easy Public

    Easy installation for libbdsg

    vgteam/libbdsg-easy’s past year of commit activity
    Makefile 0 2 0 0 Updated Nov 22, 2024
  • libhandlegraph Public

    Library for the Handle Graph abstraction

    vgteam/libhandlegraph’s past year of commit activity
    C++ 23 MIT 5 15 2 Updated Nov 21, 2024
  • sequenceTubeMap Public

    displays multiple genomic sequences in the form of a tube map

    vgteam/sequenceTubeMap’s past year of commit activity
    JavaScript 186 MIT 26 83 9 Updated Nov 20, 2024
  • toil-vg Public

    Distributed and cloud computing framework for vg

    vgteam/toil-vg’s past year of commit activity
    Python 21 Apache-2.0 14 45 (1 issue needs help) 6 Updated Nov 5, 2024
  • sdsl-lite Public Forked from simongog/sdsl-lite

    Succinct Data Structure Library 2.0

    vgteam/sdsl-lite’s past year of commit activity
    C++ 8 357 0 1 Updated Nov 4, 2024
  • vg_wdl Public

    Workflow Description Language (WDL) scripts for common vg workflows

    vgteam/vg_wdl’s past year of commit activity
    WDL 19 MIT 9 10 2 Updated Oct 30, 2024
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